Protein–RNA interactions for Protein: P24046

GABRR1, Gamma-aminobutyric acid receptor subunit rho-1, humanhuman

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRR1P24046 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC20.27■□□□□ 0.84
GABRR1P24046 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
GABRR1P24046 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
GABRR1P24046 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
GABRR1P24046 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.27■□□□□ 0.83
GABRR1P24046 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
GABRR1P24046 AC097639.1-201ENST00000565519 1891 ntBASIC20.26■□□□□ 0.83
GABRR1P24046 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
GABRR1P24046 SMPD5-203ENST00000639008 1464 ntBASIC20.26■□□□□ 0.83
GABRR1P24046 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
GABRR1P24046 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
GABRR1P24046 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
GABRR1P24046 AC092296.2-201ENST00000589470 999 ntBASIC20.26■□□□□ 0.83
GABRR1P24046 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC20.26■□□□□ 0.83
GABRR1P24046 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC20.26■□□□□ 0.83
GABRR1P24046 REST-210ENST00000638187 1334 ntTSL 5 BASIC20.26■□□□□ 0.83
GABRR1P24046 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
GABRR1P24046 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC20.25■□□□□ 0.83
GABRR1P24046 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
GABRR1P24046 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC20.25■□□□□ 0.83
GABRR1P24046 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
GABRR1P24046 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
GABRR1P24046 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
GABRR1P24046 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC20.24■□□□□ 0.83
GABRR1P24046 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
GABRR1P24046 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
GABRR1P24046 PFN2-211ENST00000489155 636 ntTSL 4 BASIC20.24■□□□□ 0.83
GABRR1P24046 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
GABRR1P24046 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
GABRR1P24046 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
GABRR1P24046 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
GABRR1P24046 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
GABRR1P24046 GPX1-201ENST00000419349 1106 ntBASIC20.23■□□□□ 0.83
GABRR1P24046 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
GABRR1P24046 ECEL1P2-201ENST00000461596 1295 ntBASIC20.23■□□□□ 0.83
GABRR1P24046 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
GABRR1P24046 AC025884.2-201ENST00000553429 711 ntBASIC20.23■□□□□ 0.83
GABRR1P24046 MIR3960-201ENST00000583311 91 ntBASIC20.23■□□□□ 0.83
GABRR1P24046 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
GABRR1P24046 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC20.23■□□□□ 0.83
GABRR1P24046 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
GABRR1P24046 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC20.23■□□□□ 0.83
GABRR1P24046 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
GABRR1P24046 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
GABRR1P24046 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
GABRR1P24046 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
GABRR1P24046 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC20.21■□□□□ 0.83
GABRR1P24046 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
GABRR1P24046 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
GABRR1P24046 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
GABRR1P24046 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
GABRR1P24046 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
GABRR1P24046 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
GABRR1P24046 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
GABRR1P24046 HES4-202ENST00000428771 1040 ntTSL 2 BASIC20.2■□□□□ 0.82
GABRR1P24046 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC20.2■□□□□ 0.82
GABRR1P24046 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
GABRR1P24046 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
GABRR1P24046 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
GABRR1P24046 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
GABRR1P24046 SLC6A10P-202ENST00000431994 2058 ntBASIC20.19■□□□□ 0.82
GABRR1P24046 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
GABRR1P24046 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC20.19■□□□□ 0.82
GABRR1P24046 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
GABRR1P24046 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
GABRR1P24046 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
GABRR1P24046 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC20.18■□□□□ 0.82
GABRR1P24046 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
GABRR1P24046 LINC01124-201ENST00000409786 2117 ntBASIC20.18■□□□□ 0.82
GABRR1P24046 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
GABRR1P24046 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC20.18■□□□□ 0.82
GABRR1P24046 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC20.18■□□□□ 0.82
GABRR1P24046 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
GABRR1P24046 AP003733.4-201ENST00000623785 1697 ntBASIC20.18■□□□□ 0.82
GABRR1P24046 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
GABRR1P24046 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
GABRR1P24046 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
GABRR1P24046 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
GABRR1P24046 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
GABRR1P24046 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
GABRR1P24046 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
GABRR1P24046 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
GABRR1P24046 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
GABRR1P24046 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
GABRR1P24046 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
GABRR1P24046 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
GABRR1P24046 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC20.17■□□□□ 0.82
GABRR1P24046 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
GABRR1P24046 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
GABRR1P24046 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC20.17■□□□□ 0.82
GABRR1P24046 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
GABRR1P24046 ABHD17AP3-201ENST00000503096 1137 ntBASIC20.16■□□□□ 0.82
GABRR1P24046 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC20.16■□□□□ 0.82
GABRR1P24046 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC20.16■□□□□ 0.82
GABRR1P24046 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
GABRR1P24046 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC20.16■□□□□ 0.82
GABRR1P24046 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
GABRR1P24046 TMEM202-AS1-202ENST00000565181 2325 ntBASIC20.15■□□□□ 0.82
GABRR1P24046 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
GABRR1P24046 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms