Protein–RNA interactions for Protein: P09001

MRPL3, 39S ribosomal protein L3, mitochondrial, humanhuman

Known RBP Predictions only

Length 348 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL3P09001 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC21.21■□□□□ 0.99
MRPL3P09001 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC21.21■□□□□ 0.99
MRPL3P09001 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC21.21■□□□□ 0.99
MRPL3P09001 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
MRPL3P09001 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
MRPL3P09001 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC21.21■□□□□ 0.99
MRPL3P09001 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
MRPL3P09001 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
MRPL3P09001 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
MRPL3P09001 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
MRPL3P09001 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
MRPL3P09001 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
MRPL3P09001 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
MRPL3P09001 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
MRPL3P09001 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
MRPL3P09001 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
MRPL3P09001 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
MRPL3P09001 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
MRPL3P09001 GDI1-215ENST00000630693 786 ntTSL 4 BASIC21.19■□□□□ 0.98
MRPL3P09001 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
MRPL3P09001 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
MRPL3P09001 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
MRPL3P09001 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
MRPL3P09001 EED-207ENST00000528180 1745 ntTSL 5 BASIC21.18■□□□□ 0.98
MRPL3P09001 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
MRPL3P09001 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC21.18■□□□□ 0.98
MRPL3P09001 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
MRPL3P09001 RARA-203ENST00000394086 2008 ntTSL 2 BASIC21.18■□□□□ 0.98
MRPL3P09001 METRNL-202ENST00000570778 967 ntTSL 5 BASIC21.18■□□□□ 0.98
MRPL3P09001 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC21.18■□□□□ 0.98
MRPL3P09001 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
MRPL3P09001 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
MRPL3P09001 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
MRPL3P09001 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
MRPL3P09001 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
MRPL3P09001 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC21.17■□□□□ 0.98
MRPL3P09001 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
MRPL3P09001 MIR3648-2-201ENST00000581792 180 ntBASIC21.17■□□□□ 0.98
MRPL3P09001 MIR3648-1-201ENST00000615959 180 ntBASIC21.17■□□□□ 0.98
MRPL3P09001 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
MRPL3P09001 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC21.17■□□□□ 0.98
MRPL3P09001 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
MRPL3P09001 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
MRPL3P09001 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
MRPL3P09001 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
MRPL3P09001 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC21.16■□□□□ 0.98
MRPL3P09001 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
MRPL3P09001 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC21.16■□□□□ 0.98
MRPL3P09001 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
MRPL3P09001 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC21.15■□□□□ 0.98
MRPL3P09001 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.15■□□□□ 0.98
MRPL3P09001 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
MRPL3P09001 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
MRPL3P09001 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
MRPL3P09001 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
MRPL3P09001 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
MRPL3P09001 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
MRPL3P09001 ABHD17AP4-201ENST00000411545 909 ntBASIC21.14■□□□□ 0.97
MRPL3P09001 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
MRPL3P09001 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
MRPL3P09001 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
MRPL3P09001 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
MRPL3P09001 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC21.14■□□□□ 0.97
MRPL3P09001 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
MRPL3P09001 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC21.13■□□□□ 0.97
MRPL3P09001 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
MRPL3P09001 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
MRPL3P09001 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
MRPL3P09001 AC016575.1-201ENST00000607026 382 ntBASIC21.13■□□□□ 0.97
MRPL3P09001 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC21.13■□□□□ 0.97
MRPL3P09001 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
MRPL3P09001 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
MRPL3P09001 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
MRPL3P09001 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
MRPL3P09001 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
MRPL3P09001 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC21.12■□□□□ 0.97
MRPL3P09001 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC21.12■□□□□ 0.97
MRPL3P09001 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
MRPL3P09001 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
MRPL3P09001 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
MRPL3P09001 CASK-201ENST00000378154 2494 ntTSL 5 BASIC21.11■□□□□ 0.97
MRPL3P09001 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC21.11■□□□□ 0.97
MRPL3P09001 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC21.11■□□□□ 0.97
MRPL3P09001 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
MRPL3P09001 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
MRPL3P09001 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
MRPL3P09001 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
MRPL3P09001 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
MRPL3P09001 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
MRPL3P09001 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
MRPL3P09001 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
MRPL3P09001 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC21.1■□□□□ 0.97
MRPL3P09001 AL157400.5-201ENST00000507624 621 ntBASIC21.1■□□□□ 0.97
MRPL3P09001 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
MRPL3P09001 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
MRPL3P09001 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
MRPL3P09001 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
MRPL3P09001 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
MRPL3P09001 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC21.1■□□□□ 0.97
MRPL3P09001 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms