Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
THBS1P07996 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC21.87■■□□□ 1.09
THBS1P07996 RNF126P1-201ENST00000567452 1320 ntBASIC21.87■■□□□ 1.09
THBS1P07996 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
THBS1P07996 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
THBS1P07996 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
THBS1P07996 KRT18P10-201ENST00000388836 1287 ntBASIC21.87■■□□□ 1.09
THBS1P07996 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
THBS1P07996 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
THBS1P07996 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
THBS1P07996 AL139125.2-201ENST00000623134 1869 ntBASIC21.86■■□□□ 1.09
THBS1P07996 AC093323.1-202ENST00000635031 2045 ntBASIC21.86■■□□□ 1.09
THBS1P07996 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
THBS1P07996 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
THBS1P07996 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
THBS1P07996 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
THBS1P07996 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC21.86■■□□□ 1.09
THBS1P07996 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
THBS1P07996 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC21.86■■□□□ 1.09
THBS1P07996 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC21.85■■□□□ 1.09
THBS1P07996 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
THBS1P07996 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
THBS1P07996 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
THBS1P07996 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
THBS1P07996 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
THBS1P07996 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
THBS1P07996 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
THBS1P07996 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
THBS1P07996 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
THBS1P07996 HES4-204ENST00000484667 667 ntTSL 3 BASIC21.84■■□□□ 1.09
THBS1P07996 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
THBS1P07996 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC21.83■■□□□ 1.09
THBS1P07996 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
THBS1P07996 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
THBS1P07996 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC21.83■■□□□ 1.09
THBS1P07996 ABHD17AP5-201ENST00000580133 923 ntBASIC21.83■■□□□ 1.09
THBS1P07996 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
THBS1P07996 EED-207ENST00000528180 1745 ntTSL 5 BASIC21.83■■□□□ 1.08
THBS1P07996 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
THBS1P07996 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
THBS1P07996 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
THBS1P07996 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC21.82■■□□□ 1.08
THBS1P07996 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
THBS1P07996 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
THBS1P07996 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
THBS1P07996 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
THBS1P07996 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC21.81■■□□□ 1.08
THBS1P07996 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
THBS1P07996 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
THBS1P07996 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
THBS1P07996 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
THBS1P07996 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
THBS1P07996 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
THBS1P07996 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
THBS1P07996 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
THBS1P07996 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC21.8■■□□□ 1.08
THBS1P07996 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
THBS1P07996 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
THBS1P07996 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
THBS1P07996 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
THBS1P07996 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
THBS1P07996 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC21.78■■□□□ 1.08
THBS1P07996 AC009831.1-201ENST00000580420 1582 ntBASIC21.78■■□□□ 1.08
THBS1P07996 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC21.78■■□□□ 1.08
THBS1P07996 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
THBS1P07996 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
THBS1P07996 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
THBS1P07996 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC21.78■■□□□ 1.08
THBS1P07996 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
THBS1P07996 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
THBS1P07996 PREB-202ENST00000406567 1910 ntTSL 5 BASIC21.78■■□□□ 1.08
THBS1P07996 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
THBS1P07996 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
THBS1P07996 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
THBS1P07996 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
THBS1P07996 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
THBS1P07996 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC21.77■■□□□ 1.08
THBS1P07996 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC21.77■■□□□ 1.08
THBS1P07996 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
THBS1P07996 MIR6089-201ENST00000616698 64 ntBASIC21.77■■□□□ 1.08
THBS1P07996 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
THBS1P07996 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
THBS1P07996 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC21.77■■□□□ 1.08
THBS1P07996 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
THBS1P07996 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
THBS1P07996 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
THBS1P07996 AC133552.2-201ENST00000619106 1032 ntBASIC21.76■■□□□ 1.07
THBS1P07996 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
THBS1P07996 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
THBS1P07996 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC21.76■■□□□ 1.07
THBS1P07996 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC21.75■■□□□ 1.07
THBS1P07996 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
THBS1P07996 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
THBS1P07996 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC21.75■■□□□ 1.07
THBS1P07996 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
THBS1P07996 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
THBS1P07996 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
THBS1P07996 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
THBS1P07996 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC21.75■■□□□ 1.07
THBS1P07996 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC21.75■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 14.7 ms