Protein–RNA interactions for Protein: P07197

NEFM, Neurofilament medium polypeptide, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEFMP07197 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC31.59■■■□□ 2.65
NEFMP07197 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
NEFMP07197 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
NEFMP07197 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC31.59■■■□□ 2.65
NEFMP07197 PVT1_1.1-201ENST00000615125 194 ntBASIC31.59■■■□□ 2.65
NEFMP07197 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC31.59■■■□□ 2.65
NEFMP07197 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC31.59■■■□□ 2.65
NEFMP07197 AC010501.1-201ENST00000606270 1962 ntBASIC31.59■■■□□ 2.65
NEFMP07197 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
NEFMP07197 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
NEFMP07197 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC31.57■■■□□ 2.64
NEFMP07197 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC31.57■■■□□ 2.64
NEFMP07197 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC31.57■■■□□ 2.64
NEFMP07197 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC31.57■■■□□ 2.64
NEFMP07197 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC31.57■■■□□ 2.64
NEFMP07197 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC31.57■■■□□ 2.64
NEFMP07197 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC31.57■■■□□ 2.64
NEFMP07197 PKM-204ENST00000449901 2526 ntTSL 2 BASIC31.56■■■□□ 2.64
NEFMP07197 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
NEFMP07197 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC31.56■■■□□ 2.64
NEFMP07197 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
NEFMP07197 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
NEFMP07197 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC31.55■■■□□ 2.64
NEFMP07197 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
NEFMP07197 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC31.55■■■□□ 2.64
NEFMP07197 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC31.55■■■□□ 2.64
NEFMP07197 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC31.55■■■□□ 2.64
NEFMP07197 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC31.54■■■□□ 2.64
NEFMP07197 MIR4508-201ENST00000584178 70 ntBASIC31.54■■■□□ 2.64
NEFMP07197 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
NEFMP07197 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC31.54■■■□□ 2.64
NEFMP07197 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
NEFMP07197 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
NEFMP07197 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC31.53■■■□□ 2.64
NEFMP07197 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC31.53■■■□□ 2.64
NEFMP07197 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
NEFMP07197 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
NEFMP07197 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.64
NEFMP07197 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC31.51■■■□□ 2.64
NEFMP07197 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC31.51■■■□□ 2.64
NEFMP07197 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC31.51■■■□□ 2.63
NEFMP07197 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
NEFMP07197 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC31.51■■■□□ 2.63
NEFMP07197 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC31.51■■■□□ 2.63
NEFMP07197 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC31.5■■■□□ 2.63
NEFMP07197 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
NEFMP07197 AC096887.2-201ENST00000623443 1957 ntBASIC31.5■■■□□ 2.63
NEFMP07197 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC31.5■■■□□ 2.63
NEFMP07197 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC31.5■■■□□ 2.63
NEFMP07197 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
NEFMP07197 AC022616.5-201ENST00000518796 181 ntBASIC31.5■■■□□ 2.63
NEFMP07197 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
NEFMP07197 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
NEFMP07197 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
NEFMP07197 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
NEFMP07197 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC31.49■■■□□ 2.63
NEFMP07197 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
NEFMP07197 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC31.49■■■□□ 2.63
NEFMP07197 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC31.49■■■□□ 2.63
NEFMP07197 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
NEFMP07197 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC31.49■■■□□ 2.63
NEFMP07197 AC103834.1-201ENST00000520383 144 ntBASIC31.48■■■□□ 2.63
NEFMP07197 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC31.48■■■□□ 2.63
NEFMP07197 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC31.47■■■□□ 2.63
NEFMP07197 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC31.47■■■□□ 2.63
NEFMP07197 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC31.47■■■□□ 2.63
NEFMP07197 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
NEFMP07197 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC31.47■■■□□ 2.63
NEFMP07197 AC097639.1-201ENST00000565519 1891 ntBASIC31.46■■■□□ 2.63
NEFMP07197 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC31.46■■■□□ 2.63
NEFMP07197 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
NEFMP07197 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC31.46■■■□□ 2.63
NEFMP07197 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC31.46■■■□□ 2.63
NEFMP07197 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC31.46■■■□□ 2.63
NEFMP07197 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC31.45■■■□□ 2.63
NEFMP07197 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.62
NEFMP07197 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC31.45■■■□□ 2.62
NEFMP07197 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC31.44■■■□□ 2.62
NEFMP07197 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
NEFMP07197 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
NEFMP07197 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC31.44■■■□□ 2.62
NEFMP07197 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC31.43■■■□□ 2.62
NEFMP07197 AC091060.1-201ENST00000623524 1766 ntBASIC31.43■■■□□ 2.62
NEFMP07197 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC31.43■■■□□ 2.62
NEFMP07197 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC31.42■■■□□ 2.62
NEFMP07197 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC31.42■■■□□ 2.62
NEFMP07197 AL592295.1-201ENST00000400984 884 ntBASIC31.42■■■□□ 2.62
NEFMP07197 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC31.42■■■□□ 2.62
NEFMP07197 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC31.42■■■□□ 2.62
NEFMP07197 AC145676.1-201ENST00000514988 2004 ntBASIC31.42■■■□□ 2.62
NEFMP07197 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC31.41■■■□□ 2.62
NEFMP07197 DUSP8P4-201ENST00000399538 1761 ntBASIC31.41■■■□□ 2.62
NEFMP07197 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
NEFMP07197 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC31.41■■■□□ 2.62
NEFMP07197 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
NEFMP07197 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
NEFMP07197 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
NEFMP07197 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC31.4■■■□□ 2.62
NEFMP07197 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC31.4■■■□□ 2.62
NEFMP07197 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms