Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 AC010501.1-201ENST00000606270 1962 ntBASIC21.74■■□□□ 1.07
P04436 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
P04436 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
P04436 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
P04436 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC21.73■■□□□ 1.07
P04436 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC21.73■■□□□ 1.07
P04436 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
P04436 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC21.73■■□□□ 1.07
P04436 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
P04436 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
P04436 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
P04436 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
P04436 AC009299.2-201ENST00000482477 511 ntBASIC21.72■■□□□ 1.07
P04436 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
P04436 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
P04436 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC21.71■■□□□ 1.07
P04436 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
P04436 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
P04436 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
P04436 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
P04436 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
P04436 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
P04436 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC21.71■■□□□ 1.07
P04436 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC21.7■■□□□ 1.07
P04436 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.7■■□□□ 1.07
P04436 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
P04436 AC096887.2-201ENST00000623443 1957 ntBASIC21.7■■□□□ 1.07
P04436 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
P04436 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
P04436 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
P04436 PRTG-204ENST00000561292 833 ntTSL 3 BASIC21.7■■□□□ 1.06
P04436 TK2-216ENST00000564917 1156 ntTSL 3 BASIC21.7■■□□□ 1.06
P04436 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC21.7■■□□□ 1.06
P04436 THA1P-201ENST00000590384 1145 ntBASIC21.7■■□□□ 1.06
P04436 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC21.7■■□□□ 1.06
P04436 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
P04436 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
P04436 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
P04436 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
P04436 AC097639.1-201ENST00000565519 1891 ntBASIC21.69■■□□□ 1.06
P04436 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
P04436 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
P04436 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC21.69■■□□□ 1.06
P04436 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
P04436 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
P04436 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
P04436 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
P04436 KRT18P24-201ENST00000344739 1156 ntBASIC21.68■■□□□ 1.06
P04436 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC21.68■■□□□ 1.06
P04436 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
P04436 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
P04436 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
P04436 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
P04436 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
P04436 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC21.67■■□□□ 1.06
P04436 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC21.67■■□□□ 1.06
P04436 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC21.67■■□□□ 1.06
P04436 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC21.67■■□□□ 1.06
P04436 TRIR-205ENST00000592273 783 ntTSL 3 BASIC21.67■■□□□ 1.06
P04436 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
P04436 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
P04436 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
P04436 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
P04436 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
P04436 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
P04436 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
P04436 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
P04436 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC21.65■■□□□ 1.06
P04436 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
P04436 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
P04436 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC21.65■■□□□ 1.06
P04436 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC21.65■■□□□ 1.06
P04436 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
P04436 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
P04436 RNF146-205ENST00000477776 762 ntTSL 3 BASIC21.65■■□□□ 1.06
P04436 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
P04436 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
P04436 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.06
P04436 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC21.64■■□□□ 1.06
P04436 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
P04436 AC120024.1-201ENST00000562672 995 ntBASIC21.64■■□□□ 1.05
P04436 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
P04436 FOXO3B-201ENST00000395675 1928 ntBASIC21.64■■□□□ 1.05
P04436 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC21.63■■□□□ 1.05
P04436 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
P04436 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
P04436 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC21.63■■□□□ 1.05
P04436 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC21.63■■□□□ 1.05
P04436 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC21.63■■□□□ 1.05
P04436 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC21.63■■□□□ 1.05
P04436 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
P04436 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
P04436 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
P04436 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
P04436 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
P04436 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
P04436 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC21.62■■□□□ 1.05
P04436 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
P04436 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
P04436 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms