Protein–RNA interactions for Protein: P03979

TRGV3, T cell receptor gamma variable 3 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV3P03979 AL033527.3-201ENST00000566366 1196 ntBASIC18.61■□□□□ 0.57
TRGV3P03979 BHLHE23-202ENST00000612929 1109 ntBASIC18.61■□□□□ 0.57
TRGV3P03979 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRGV3P03979 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TRGV3P03979 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
TRGV3P03979 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC18.6■□□□□ 0.57
TRGV3P03979 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC18.6■□□□□ 0.57
TRGV3P03979 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
TRGV3P03979 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRGV3P03979 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TRGV3P03979 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRGV3P03979 RPS2P7-201ENST00000447334 885 ntBASIC18.6■□□□□ 0.57
TRGV3P03979 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRGV3P03979 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRGV3P03979 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC18.6■□□□□ 0.57
TRGV3P03979 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
TRGV3P03979 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRGV3P03979 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC18.59■□□□□ 0.57
TRGV3P03979 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRGV3P03979 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRGV3P03979 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TRGV3P03979 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRGV3P03979 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRGV3P03979 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
TRGV3P03979 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC18.58■□□□□ 0.56
TRGV3P03979 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRGV3P03979 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC18.58■□□□□ 0.56
TRGV3P03979 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRGV3P03979 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRGV3P03979 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRGV3P03979 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRGV3P03979 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC18.57■□□□□ 0.56
TRGV3P03979 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
TRGV3P03979 AC087393.1-201ENST00000582896 145 ntBASIC18.57■□□□□ 0.56
TRGV3P03979 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TRGV3P03979 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TRGV3P03979 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
TRGV3P03979 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRGV3P03979 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC18.56■□□□□ 0.56
TRGV3P03979 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRGV3P03979 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRGV3P03979 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TRGV3P03979 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRGV3P03979 GUK1-208ENST00000366728 842 ntTSL 2 BASIC18.56■□□□□ 0.56
TRGV3P03979 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC18.56■□□□□ 0.56
TRGV3P03979 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TRGV3P03979 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC18.56■□□□□ 0.56
TRGV3P03979 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRGV3P03979 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TRGV3P03979 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRGV3P03979 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRGV3P03979 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TRGV3P03979 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC18.55■□□□□ 0.56
TRGV3P03979 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC18.55■□□□□ 0.56
TRGV3P03979 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC18.55■□□□□ 0.56
TRGV3P03979 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TRGV3P03979 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRGV3P03979 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRGV3P03979 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC18.55■□□□□ 0.56
TRGV3P03979 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRGV3P03979 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC18.55■□□□□ 0.56
TRGV3P03979 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRGV3P03979 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRGV3P03979 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRGV3P03979 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRGV3P03979 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRGV3P03979 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRGV3P03979 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRGV3P03979 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC18.54■□□□□ 0.56
TRGV3P03979 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC18.54■□□□□ 0.56
TRGV3P03979 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRGV3P03979 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRGV3P03979 CEBPA-AS1-201ENST00000592982 2198 ntBASIC18.54■□□□□ 0.56
TRGV3P03979 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRGV3P03979 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRGV3P03979 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRGV3P03979 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TRGV3P03979 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
TRGV3P03979 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
TRGV3P03979 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRGV3P03979 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRGV3P03979 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRGV3P03979 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC18.53■□□□□ 0.56
TRGV3P03979 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TRGV3P03979 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRGV3P03979 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRGV3P03979 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC18.52■□□□□ 0.56
TRGV3P03979 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC18.52■□□□□ 0.56
TRGV3P03979 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
TRGV3P03979 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TRGV3P03979 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRGV3P03979 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TRGV3P03979 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
TRGV3P03979 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC18.51■□□□□ 0.55
TRGV3P03979 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC18.51■□□□□ 0.55
TRGV3P03979 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRGV3P03979 AC074183.2-201ENST00000623112 922 ntBASIC18.51■□□□□ 0.55
TRGV3P03979 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRGV3P03979 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRGV3P03979 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 306.9 ms