Protein–RNA interactions for Protein: O95164

UBL3, Ubiquitin-like protein 3, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL3O95164 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
UBL3O95164 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
UBL3O95164 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
UBL3O95164 PREB-202ENST00000406567 1910 ntTSL 5 BASIC21.17■□□□□ 0.98
UBL3O95164 MED17-227ENST00000640521 2047 ntTSL 5 BASIC21.17■□□□□ 0.98
UBL3O95164 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
UBL3O95164 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC21.16■□□□□ 0.98
UBL3O95164 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
UBL3O95164 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC21.16■□□□□ 0.98
UBL3O95164 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC21.16■□□□□ 0.98
UBL3O95164 RAP2CP1-202ENST00000605179 643 ntBASIC21.16■□□□□ 0.98
UBL3O95164 AC133552.2-201ENST00000619106 1032 ntBASIC21.16■□□□□ 0.98
UBL3O95164 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
UBL3O95164 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
UBL3O95164 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
UBL3O95164 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
UBL3O95164 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
UBL3O95164 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
UBL3O95164 TMEM202-AS1-202ENST00000565181 2325 ntBASIC21.15■□□□□ 0.98
UBL3O95164 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
UBL3O95164 AC009831.1-201ENST00000580420 1582 ntBASIC21.14■□□□□ 0.98
UBL3O95164 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
UBL3O95164 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC21.14■□□□□ 0.98
UBL3O95164 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
UBL3O95164 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
UBL3O95164 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
UBL3O95164 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
UBL3O95164 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
UBL3O95164 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
UBL3O95164 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
UBL3O95164 AL139125.2-201ENST00000623134 1869 ntBASIC21.13■□□□□ 0.97
UBL3O95164 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC21.13■□□□□ 0.97
UBL3O95164 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
UBL3O95164 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
UBL3O95164 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
UBL3O95164 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
UBL3O95164 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC21.13■□□□□ 0.97
UBL3O95164 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC21.12■□□□□ 0.97
UBL3O95164 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
UBL3O95164 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
UBL3O95164 AC010501.1-201ENST00000606270 1962 ntBASIC21.12■□□□□ 0.97
UBL3O95164 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
UBL3O95164 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
UBL3O95164 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
UBL3O95164 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC21.11■□□□□ 0.97
UBL3O95164 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
UBL3O95164 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC21.1■□□□□ 0.97
UBL3O95164 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
UBL3O95164 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
UBL3O95164 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
UBL3O95164 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
UBL3O95164 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
UBL3O95164 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
UBL3O95164 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC21.1■□□□□ 0.97
UBL3O95164 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC21.1■□□□□ 0.97
UBL3O95164 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC21.1■□□□□ 0.97
UBL3O95164 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC21.1■□□□□ 0.97
UBL3O95164 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
UBL3O95164 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
UBL3O95164 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC21.1■□□□□ 0.97
UBL3O95164 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
UBL3O95164 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
UBL3O95164 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
UBL3O95164 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
UBL3O95164 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC21.09■□□□□ 0.97
UBL3O95164 NTF6A-201ENST00000591175 560 ntBASIC21.09■□□□□ 0.97
UBL3O95164 U85056.1-201ENST00000616429 682 ntBASIC21.09■□□□□ 0.97
UBL3O95164 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
UBL3O95164 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC21.09■□□□□ 0.97
UBL3O95164 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
UBL3O95164 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
UBL3O95164 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.08■□□□□ 0.97
UBL3O95164 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
UBL3O95164 AL592293.1-201ENST00000502889 1188 ntBASIC21.08■□□□□ 0.97
UBL3O95164 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
UBL3O95164 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
UBL3O95164 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
UBL3O95164 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
UBL3O95164 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC21.08■□□□□ 0.96
UBL3O95164 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
UBL3O95164 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
UBL3O95164 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
UBL3O95164 AC138932.3-201ENST00000567634 1902 ntBASIC21.07■□□□□ 0.96
UBL3O95164 AC022211.4-201ENST00000625094 2161 ntBASIC21.07■□□□□ 0.96
UBL3O95164 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
UBL3O95164 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
UBL3O95164 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
UBL3O95164 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC21.06■□□□□ 0.96
UBL3O95164 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
UBL3O95164 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
UBL3O95164 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
UBL3O95164 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
UBL3O95164 AC012676.1-201ENST00000574705 1949 ntBASIC21.06■□□□□ 0.96
UBL3O95164 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
UBL3O95164 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
UBL3O95164 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
UBL3O95164 AC133561.1-201ENST00000568600 2415 ntBASIC21.05■□□□□ 0.96
UBL3O95164 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
UBL3O95164 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
UBL3O95164 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms