Protein–RNA interactions for Protein: O76031

CLPX, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPXO76031 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CLPXO76031 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC21.42■■□□□ 1.02
CLPXO76031 AL024507.2-201ENST00000606070 2574 ntBASIC21.42■■□□□ 1.02
CLPXO76031 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CLPXO76031 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC21.41■■□□□ 1.02
CLPXO76031 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CLPXO76031 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC21.41■■□□□ 1.02
CLPXO76031 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CLPXO76031 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
CLPXO76031 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC21.41■■□□□ 1.02
CLPXO76031 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CLPXO76031 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
CLPXO76031 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CLPXO76031 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
CLPXO76031 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CLPXO76031 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CLPXO76031 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CLPXO76031 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC21.4■■□□□ 1.02
CLPXO76031 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC21.4■■□□□ 1.02
CLPXO76031 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC21.4■■□□□ 1.02
CLPXO76031 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CLPXO76031 C9orf163-202ENST00000624034 2573 ntBASIC21.39■■□□□ 1.01
CLPXO76031 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC21.39■■□□□ 1.01
CLPXO76031 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC21.39■■□□□ 1.01
CLPXO76031 MIR6090-201ENST00000622481 60 ntBASIC21.39■■□□□ 1.01
CLPXO76031 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CLPXO76031 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CLPXO76031 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
CLPXO76031 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
CLPXO76031 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
CLPXO76031 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
CLPXO76031 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CLPXO76031 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CLPXO76031 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC21.37■■□□□ 1.01
CLPXO76031 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CLPXO76031 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC21.37■■□□□ 1.01
CLPXO76031 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC21.37■■□□□ 1.01
CLPXO76031 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
CLPXO76031 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC21.36■■□□□ 1.01
CLPXO76031 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC21.36■■□□□ 1.01
CLPXO76031 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC21.36■■□□□ 1.01
CLPXO76031 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CLPXO76031 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
CLPXO76031 LINC00565-201ENST00000562710 2331 ntBASIC21.35■■□□□ 1.01
CLPXO76031 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CLPXO76031 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CLPXO76031 HLA-V-202ENST00000446817 847 ntBASIC21.35■■□□□ 1.01
CLPXO76031 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CLPXO76031 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CLPXO76031 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
CLPXO76031 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC21.35■■□□□ 1.01
CLPXO76031 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CLPXO76031 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CLPXO76031 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC21.34■■□□□ 1.01
CLPXO76031 ZNRF2P2-203ENST00000454624 420 ntBASIC21.34■■□□□ 1.01
CLPXO76031 MBP-237ENST00000579129 1052 ntTSL 5 BASIC21.34■■□□□ 1.01
CLPXO76031 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CLPXO76031 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CLPXO76031 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
CLPXO76031 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CLPXO76031 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CLPXO76031 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CLPXO76031 EI24-212ENST00000615917 1407 ntTSL 2 BASIC21.33■■□□□ 1.01
CLPXO76031 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CLPXO76031 CIB2-204ENST00000557846 934 ntTSL 3 BASIC21.33■■□□□ 1.01
CLPXO76031 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CLPXO76031 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC21.33■■□□□ 1
CLPXO76031 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CLPXO76031 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
CLPXO76031 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CLPXO76031 AC141586.4-201ENST00000624558 1573 ntBASIC21.32■■□□□ 1
CLPXO76031 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC21.32■■□□□ 1
CLPXO76031 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CLPXO76031 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CLPXO76031 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
CLPXO76031 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CLPXO76031 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
CLPXO76031 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
CLPXO76031 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC21.31■■□□□ 1
CLPXO76031 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC21.31■■□□□ 1
CLPXO76031 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
CLPXO76031 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CLPXO76031 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CLPXO76031 STK25-234ENST00000535007 2459 ntTSL 2 BASIC21.31■■□□□ 1
CLPXO76031 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC21.31■■□□□ 1
CLPXO76031 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC21.31■■□□□ 1
CLPXO76031 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC21.3■■□□□ 1
CLPXO76031 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC21.3■■□□□ 1
CLPXO76031 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC21.3■■□□□ 1
CLPXO76031 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC21.3■■□□□ 1
CLPXO76031 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC21.3■■□□□ 1
CLPXO76031 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC21.3■■□□□ 1
CLPXO76031 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC21.29■■□□□ 1
CLPXO76031 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC21.29■■□□□ 1
CLPXO76031 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
CLPXO76031 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
CLPXO76031 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CLPXO76031 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC21.29■■□□□ 1
CLPXO76031 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC21.29■■□□□ 1
CLPXO76031 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms