Protein–RNA interactions for Protein: O60637

TSPAN3, Tetraspanin-3, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3O60637 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
TSPAN3O60637 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC24.55■■□□□ 1.52
TSPAN3O60637 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC24.55■■□□□ 1.52
TSPAN3O60637 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC24.55■■□□□ 1.52
TSPAN3O60637 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
TSPAN3O60637 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC24.55■■□□□ 1.52
TSPAN3O60637 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC24.54■■□□□ 1.52
TSPAN3O60637 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC24.54■■□□□ 1.52
TSPAN3O60637 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC24.54■■□□□ 1.52
TSPAN3O60637 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
TSPAN3O60637 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
TSPAN3O60637 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
TSPAN3O60637 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC24.53■■□□□ 1.52
TSPAN3O60637 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
TSPAN3O60637 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
TSPAN3O60637 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC24.53■■□□□ 1.52
TSPAN3O60637 AC009299.2-201ENST00000482477 511 ntBASIC24.53■■□□□ 1.52
TSPAN3O60637 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
TSPAN3O60637 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
TSPAN3O60637 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
TSPAN3O60637 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC24.51■■□□□ 1.51
TSPAN3O60637 AC010501.1-201ENST00000606270 1962 ntBASIC24.51■■□□□ 1.51
TSPAN3O60637 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
TSPAN3O60637 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC24.51■■□□□ 1.51
TSPAN3O60637 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC24.51■■□□□ 1.51
TSPAN3O60637 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
TSPAN3O60637 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC24.51■■□□□ 1.51
TSPAN3O60637 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC24.51■■□□□ 1.51
TSPAN3O60637 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC24.51■■□□□ 1.51
TSPAN3O60637 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
TSPAN3O60637 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
TSPAN3O60637 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC24.51■■□□□ 1.51
TSPAN3O60637 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC24.51■■□□□ 1.51
TSPAN3O60637 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
TSPAN3O60637 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC24.5■■□□□ 1.51
TSPAN3O60637 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
TSPAN3O60637 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC24.5■■□□□ 1.51
TSPAN3O60637 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC24.5■■□□□ 1.51
TSPAN3O60637 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC24.5■■□□□ 1.51
TSPAN3O60637 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
TSPAN3O60637 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
TSPAN3O60637 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC24.5■■□□□ 1.51
TSPAN3O60637 PRTG-204ENST00000561292 833 ntTSL 3 BASIC24.49■■□□□ 1.51
TSPAN3O60637 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC24.49■■□□□ 1.51
TSPAN3O60637 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC24.49■■□□□ 1.51
TSPAN3O60637 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC24.49■■□□□ 1.51
TSPAN3O60637 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
TSPAN3O60637 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
TSPAN3O60637 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC24.48■■□□□ 1.51
TSPAN3O60637 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
TSPAN3O60637 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC24.48■■□□□ 1.51
TSPAN3O60637 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
TSPAN3O60637 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
TSPAN3O60637 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC24.47■■□□□ 1.51
TSPAN3O60637 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC24.47■■□□□ 1.51
TSPAN3O60637 AC022616.5-201ENST00000518796 181 ntBASIC24.47■■□□□ 1.51
TSPAN3O60637 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC24.46■■□□□ 1.51
TSPAN3O60637 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC24.46■■□□□ 1.51
TSPAN3O60637 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
TSPAN3O60637 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
TSPAN3O60637 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
TSPAN3O60637 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC24.46■■□□□ 1.51
TSPAN3O60637 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
TSPAN3O60637 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
TSPAN3O60637 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC24.46■■□□□ 1.51
TSPAN3O60637 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
TSPAN3O60637 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
TSPAN3O60637 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
TSPAN3O60637 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
TSPAN3O60637 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC24.45■■□□□ 1.5
TSPAN3O60637 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
TSPAN3O60637 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
TSPAN3O60637 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC24.44■■□□□ 1.5
TSPAN3O60637 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
TSPAN3O60637 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC24.44■■□□□ 1.5
TSPAN3O60637 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC24.44■■□□□ 1.5
TSPAN3O60637 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC24.44■■□□□ 1.5
TSPAN3O60637 AL592295.1-201ENST00000400984 884 ntBASIC24.44■■□□□ 1.5
TSPAN3O60637 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
TSPAN3O60637 TK2-216ENST00000564917 1156 ntTSL 3 BASIC24.44■■□□□ 1.5
TSPAN3O60637 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC24.44■■□□□ 1.5
TSPAN3O60637 AC097639.1-201ENST00000565519 1891 ntBASIC24.43■■□□□ 1.5
TSPAN3O60637 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC24.43■■□□□ 1.5
TSPAN3O60637 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC24.43■■□□□ 1.5
TSPAN3O60637 TRIR-205ENST00000592273 783 ntTSL 3 BASIC24.43■■□□□ 1.5
TSPAN3O60637 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC24.43■■□□□ 1.5
TSPAN3O60637 AC091060.1-201ENST00000623524 1766 ntBASIC24.43■■□□□ 1.5
TSPAN3O60637 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
TSPAN3O60637 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
TSPAN3O60637 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC24.42■■□□□ 1.5
TSPAN3O60637 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
TSPAN3O60637 RNF146-205ENST00000477776 762 ntTSL 3 BASIC24.42■■□□□ 1.5
TSPAN3O60637 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
TSPAN3O60637 AC120024.1-201ENST00000562672 995 ntBASIC24.42■■□□□ 1.5
TSPAN3O60637 THA1P-201ENST00000590384 1145 ntBASIC24.42■■□□□ 1.5
TSPAN3O60637 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
TSPAN3O60637 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC24.42■■□□□ 1.5
TSPAN3O60637 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
TSPAN3O60637 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
TSPAN3O60637 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC24.41■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 11.9 ms