Protein–RNA interactions for Protein: O43924

PDE6D, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, humanhuman

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6DO43924 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC18.36■□□□□ 0.53
PDE6DO43924 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC18.36■□□□□ 0.53
PDE6DO43924 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PDE6DO43924 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PDE6DO43924 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
PDE6DO43924 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC18.35■□□□□ 0.53
PDE6DO43924 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC18.35■□□□□ 0.53
PDE6DO43924 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
PDE6DO43924 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
PDE6DO43924 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
PDE6DO43924 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC18.35■□□□□ 0.53
PDE6DO43924 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
PDE6DO43924 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PDE6DO43924 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PDE6DO43924 MIR762-201ENST00000390236 83 ntBASIC18.34■□□□□ 0.53
PDE6DO43924 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC18.34■□□□□ 0.53
PDE6DO43924 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PDE6DO43924 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
PDE6DO43924 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PDE6DO43924 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
PDE6DO43924 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PDE6DO43924 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PDE6DO43924 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PDE6DO43924 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC18.33■□□□□ 0.53
PDE6DO43924 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PDE6DO43924 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
PDE6DO43924 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC18.33■□□□□ 0.52
PDE6DO43924 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PDE6DO43924 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
PDE6DO43924 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PDE6DO43924 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC18.32■□□□□ 0.52
PDE6DO43924 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PDE6DO43924 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PDE6DO43924 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
PDE6DO43924 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PDE6DO43924 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PDE6DO43924 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PDE6DO43924 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
PDE6DO43924 CALM3-209ENST00000597743 577 ntTSL 4 BASIC18.32■□□□□ 0.52
PDE6DO43924 CAHM-201ENST00000604200 896 ntBASIC18.32■□□□□ 0.52
PDE6DO43924 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
PDE6DO43924 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PDE6DO43924 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
PDE6DO43924 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PDE6DO43924 AL117328.2-201ENST00000624617 1940 ntBASIC18.31■□□□□ 0.52
PDE6DO43924 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
PDE6DO43924 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC18.31■□□□□ 0.52
PDE6DO43924 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
PDE6DO43924 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
PDE6DO43924 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PDE6DO43924 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
PDE6DO43924 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PDE6DO43924 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PDE6DO43924 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PDE6DO43924 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PDE6DO43924 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
PDE6DO43924 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PDE6DO43924 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC18.31■□□□□ 0.52
PDE6DO43924 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
PDE6DO43924 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
PDE6DO43924 SLC6A10P-202ENST00000431994 2058 ntBASIC18.3■□□□□ 0.52
PDE6DO43924 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PDE6DO43924 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
PDE6DO43924 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
PDE6DO43924 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC18.3■□□□□ 0.52
PDE6DO43924 CHML-205ENST00000638160 705 ntTSL 3 BASIC18.3■□□□□ 0.52
PDE6DO43924 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PDE6DO43924 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PDE6DO43924 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PDE6DO43924 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PDE6DO43924 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
PDE6DO43924 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PDE6DO43924 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC18.3■□□□□ 0.52
PDE6DO43924 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PDE6DO43924 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PDE6DO43924 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
PDE6DO43924 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PDE6DO43924 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
PDE6DO43924 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PDE6DO43924 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
PDE6DO43924 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PDE6DO43924 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PDE6DO43924 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PDE6DO43924 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PDE6DO43924 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC18.29■□□□□ 0.52
PDE6DO43924 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
PDE6DO43924 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PDE6DO43924 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC18.28■□□□□ 0.52
PDE6DO43924 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC18.28■□□□□ 0.52
PDE6DO43924 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PDE6DO43924 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
PDE6DO43924 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PDE6DO43924 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PDE6DO43924 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
PDE6DO43924 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PDE6DO43924 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC18.27■□□□□ 0.52
PDE6DO43924 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PDE6DO43924 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PDE6DO43924 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
PDE6DO43924 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms