Protein–RNA interactions for Protein: O15297

PPM1D, Protein phosphatase 1D, humanhuman

Predictions only

Length 605 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1DO15297 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
PPM1DO15297 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
PPM1DO15297 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PPM1DO15297 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC23.19■■□□□ 1.3
PPM1DO15297 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
PPM1DO15297 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC23.19■■□□□ 1.3
PPM1DO15297 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PPM1DO15297 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PPM1DO15297 GUSBP5-201ENST00000418136 578 ntBASIC23.18■■□□□ 1.3
PPM1DO15297 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC23.18■■□□□ 1.3
PPM1DO15297 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
PPM1DO15297 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
PPM1DO15297 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
PPM1DO15297 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC23.17■■□□□ 1.3
PPM1DO15297 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
PPM1DO15297 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC23.16■■□□□ 1.3
PPM1DO15297 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
PPM1DO15297 AC239859.2-201ENST00000444165 318 ntBASIC23.16■■□□□ 1.3
PPM1DO15297 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC23.16■■□□□ 1.3
PPM1DO15297 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
PPM1DO15297 AC091060.1-201ENST00000623524 1766 ntBASIC23.16■■□□□ 1.3
PPM1DO15297 SNAI3-AS1-204ENST00000567997 2048 ntBASIC23.16■■□□□ 1.3
PPM1DO15297 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
PPM1DO15297 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC23.16■■□□□ 1.3
PPM1DO15297 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
PPM1DO15297 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
PPM1DO15297 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
PPM1DO15297 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
PPM1DO15297 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
PPM1DO15297 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC23.15■■□□□ 1.3
PPM1DO15297 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
PPM1DO15297 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC23.14■■□□□ 1.3
PPM1DO15297 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
PPM1DO15297 KRT18P24-201ENST00000344739 1156 ntBASIC23.14■■□□□ 1.29
PPM1DO15297 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC23.14■■□□□ 1.29
PPM1DO15297 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC23.13■■□□□ 1.29
PPM1DO15297 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC23.13■■□□□ 1.29
PPM1DO15297 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC23.13■■□□□ 1.29
PPM1DO15297 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC23.13■■□□□ 1.29
PPM1DO15297 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
PPM1DO15297 ERN1-208ENST00000606895 2068 ntBASIC23.13■■□□□ 1.29
PPM1DO15297 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC23.13■■□□□ 1.29
PPM1DO15297 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC23.13■■□□□ 1.29
PPM1DO15297 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PPM1DO15297 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
PPM1DO15297 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC23.12■■□□□ 1.29
PPM1DO15297 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC23.12■■□□□ 1.29
PPM1DO15297 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC23.12■■□□□ 1.29
PPM1DO15297 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC23.12■■□□□ 1.29
PPM1DO15297 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC23.12■■□□□ 1.29
PPM1DO15297 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC23.11■■□□□ 1.29
PPM1DO15297 AC092803.2-201ENST00000564287 1899 ntBASIC23.11■■□□□ 1.29
PPM1DO15297 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
PPM1DO15297 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
PPM1DO15297 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC23.11■■□□□ 1.29
PPM1DO15297 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC23.11■■□□□ 1.29
PPM1DO15297 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC23.1■■□□□ 1.29
PPM1DO15297 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PPM1DO15297 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
PPM1DO15297 Z92544.1-202ENST00000571933 1220 ntBASIC23.1■■□□□ 1.29
PPM1DO15297 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PPM1DO15297 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PPM1DO15297 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PPM1DO15297 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC23.1■■□□□ 1.29
PPM1DO15297 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC23.09■■□□□ 1.29
PPM1DO15297 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC23.09■■□□□ 1.29
PPM1DO15297 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
PPM1DO15297 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC23.09■■□□□ 1.29
PPM1DO15297 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC23.09■■□□□ 1.29
PPM1DO15297 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC23.09■■□□□ 1.29
PPM1DO15297 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC23.09■■□□□ 1.29
PPM1DO15297 AC120024.1-201ENST00000562672 995 ntBASIC23.09■■□□□ 1.29
PPM1DO15297 THA1P-201ENST00000590384 1145 ntBASIC23.09■■□□□ 1.29
PPM1DO15297 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC23.08■■□□□ 1.29
PPM1DO15297 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC23.08■■□□□ 1.29
PPM1DO15297 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.29
PPM1DO15297 AL592295.1-201ENST00000400984 884 ntBASIC23.08■■□□□ 1.29
PPM1DO15297 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC23.08■■□□□ 1.29
PPM1DO15297 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
PPM1DO15297 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC23.08■■□□□ 1.28
PPM1DO15297 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
PPM1DO15297 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC23.07■■□□□ 1.28
PPM1DO15297 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PPM1DO15297 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PPM1DO15297 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC23.07■■□□□ 1.28
PPM1DO15297 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
PPM1DO15297 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
PPM1DO15297 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
PPM1DO15297 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC23.06■■□□□ 1.28
PPM1DO15297 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
PPM1DO15297 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC23.06■■□□□ 1.28
PPM1DO15297 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
PPM1DO15297 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC23.06■■□□□ 1.28
PPM1DO15297 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
PPM1DO15297 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
PPM1DO15297 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
PPM1DO15297 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC23.05■■□□□ 1.28
PPM1DO15297 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
PPM1DO15297 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
PPM1DO15297 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 15 ms