Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC22.6■■□□□ 1.21
PCDH17O14917 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
PCDH17O14917 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
PCDH17O14917 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC22.6■■□□□ 1.21
PCDH17O14917 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC22.59■■□□□ 1.21
PCDH17O14917 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC22.59■■□□□ 1.21
PCDH17O14917 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
PCDH17O14917 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC22.59■■□□□ 1.21
PCDH17O14917 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
PCDH17O14917 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
PCDH17O14917 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC22.59■■□□□ 1.21
PCDH17O14917 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
PCDH17O14917 CEBPA-AS1-201ENST00000592982 2198 ntBASIC22.58■■□□□ 1.21
PCDH17O14917 RPS2P7-201ENST00000447334 885 ntBASIC22.58■■□□□ 1.21
PCDH17O14917 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
PCDH17O14917 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
PCDH17O14917 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
PCDH17O14917 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC22.58■■□□□ 1.2
PCDH17O14917 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
PCDH17O14917 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PCDH17O14917 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC22.57■■□□□ 1.2
PCDH17O14917 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC22.57■■□□□ 1.2
PCDH17O14917 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC22.57■■□□□ 1.2
PCDH17O14917 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PCDH17O14917 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC22.56■■□□□ 1.2
PCDH17O14917 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
PCDH17O14917 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC22.56■■□□□ 1.2
PCDH17O14917 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC22.56■■□□□ 1.2
PCDH17O14917 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PCDH17O14917 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC22.55■■□□□ 1.2
PCDH17O14917 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
PCDH17O14917 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
PCDH17O14917 IDNK-201ENST00000376417 511 ntTSL 5 BASIC22.55■■□□□ 1.2
PCDH17O14917 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PCDH17O14917 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PCDH17O14917 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC22.55■■□□□ 1.2
PCDH17O14917 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PCDH17O14917 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
PCDH17O14917 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
PCDH17O14917 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
PCDH17O14917 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PCDH17O14917 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PCDH17O14917 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PCDH17O14917 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PCDH17O14917 YBX1P4-201ENST00000392794 808 ntBASIC22.54■■□□□ 1.2
PCDH17O14917 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PCDH17O14917 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC22.54■■□□□ 1.2
PCDH17O14917 MIR4508-201ENST00000584178 70 ntBASIC22.54■■□□□ 1.2
PCDH17O14917 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
PCDH17O14917 AC010980.1-201ENST00000587192 1142 ntBASIC22.54■■□□□ 1.2
PCDH17O14917 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PCDH17O14917 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
PCDH17O14917 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
PCDH17O14917 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PCDH17O14917 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PCDH17O14917 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PCDH17O14917 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC22.53■■□□□ 1.2
PCDH17O14917 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PCDH17O14917 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC22.53■■□□□ 1.2
PCDH17O14917 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PCDH17O14917 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
PCDH17O14917 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PCDH17O14917 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PCDH17O14917 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC22.52■■□□□ 1.2
PCDH17O14917 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC22.52■■□□□ 1.2
PCDH17O14917 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
PCDH17O14917 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PCDH17O14917 ERN1-208ENST00000606895 2068 ntBASIC22.51■■□□□ 1.19
PCDH17O14917 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PCDH17O14917 SNAI3-AS1-204ENST00000567997 2048 ntBASIC22.5■■□□□ 1.19
PCDH17O14917 AC093323.1-202ENST00000635031 2045 ntBASIC22.5■■□□□ 1.19
PCDH17O14917 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC22.5■■□□□ 1.19
PCDH17O14917 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC22.5■■□□□ 1.19
PCDH17O14917 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
PCDH17O14917 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
PCDH17O14917 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PCDH17O14917 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PCDH17O14917 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PCDH17O14917 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PCDH17O14917 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
PCDH17O14917 BEX3-202ENST00000372634 753 ntTSL 2 BASIC22.49■■□□□ 1.19
PCDH17O14917 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC22.49■■□□□ 1.19
PCDH17O14917 LONRF2P2-201ENST00000439212 571 ntBASIC22.49■■□□□ 1.19
PCDH17O14917 AC022616.5-201ENST00000518796 181 ntBASIC22.49■■□□□ 1.19
PCDH17O14917 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
PCDH17O14917 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
PCDH17O14917 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PCDH17O14917 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PCDH17O14917 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
PCDH17O14917 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PCDH17O14917 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
PCDH17O14917 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
PCDH17O14917 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PCDH17O14917 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
PCDH17O14917 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC22.46■■□□□ 1.19
PCDH17O14917 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
PCDH17O14917 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC22.46■■□□□ 1.19
PCDH17O14917 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC22.46■■□□□ 1.19
PCDH17O14917 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC22.46■■□□□ 1.19
PCDH17O14917 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms