Protein–RNA interactions for Protein: O00241

SIRPB1, Signal-regulatory protein beta-1, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB1O00241 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SIRPB1O00241 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SIRPB1O00241 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
SIRPB1O00241 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SIRPB1O00241 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC19.98■□□□□ 0.79
SIRPB1O00241 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
SIRPB1O00241 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SIRPB1O00241 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
SIRPB1O00241 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SIRPB1O00241 AC026202.3-201ENST00000600805 1127 ntBASIC19.98■□□□□ 0.79
SIRPB1O00241 RAP2CP1-202ENST00000605179 643 ntBASIC19.98■□□□□ 0.79
SIRPB1O00241 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SIRPB1O00241 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SIRPB1O00241 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SIRPB1O00241 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
SIRPB1O00241 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
SIRPB1O00241 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SIRPB1O00241 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SIRPB1O00241 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SIRPB1O00241 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SIRPB1O00241 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
SIRPB1O00241 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SIRPB1O00241 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SIRPB1O00241 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SIRPB1O00241 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SIRPB1O00241 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SIRPB1O00241 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC19.96■□□□□ 0.79
SIRPB1O00241 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC19.96■□□□□ 0.79
SIRPB1O00241 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SIRPB1O00241 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
SIRPB1O00241 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SIRPB1O00241 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC19.95■□□□□ 0.78
SIRPB1O00241 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SIRPB1O00241 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SIRPB1O00241 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SIRPB1O00241 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC19.95■□□□□ 0.78
SIRPB1O00241 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SIRPB1O00241 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SIRPB1O00241 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SIRPB1O00241 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
SIRPB1O00241 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SIRPB1O00241 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SIRPB1O00241 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SIRPB1O00241 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SIRPB1O00241 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC19.95■□□□□ 0.78
SIRPB1O00241 SLC6A10P-202ENST00000431994 2058 ntBASIC19.95■□□□□ 0.78
SIRPB1O00241 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SIRPB1O00241 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
SIRPB1O00241 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC19.94■□□□□ 0.78
SIRPB1O00241 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
SIRPB1O00241 HES4-204ENST00000484667 667 ntTSL 3 BASIC19.94■□□□□ 0.78
SIRPB1O00241 AC133552.2-201ENST00000619106 1032 ntBASIC19.94■□□□□ 0.78
SIRPB1O00241 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC19.94■□□□□ 0.78
SIRPB1O00241 AC009831.1-201ENST00000580420 1582 ntBASIC19.94■□□□□ 0.78
SIRPB1O00241 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SIRPB1O00241 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC19.94■□□□□ 0.78
SIRPB1O00241 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
SIRPB1O00241 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SIRPB1O00241 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SIRPB1O00241 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
SIRPB1O00241 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
SIRPB1O00241 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SIRPB1O00241 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SIRPB1O00241 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
SIRPB1O00241 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SIRPB1O00241 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SIRPB1O00241 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
SIRPB1O00241 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SIRPB1O00241 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
SIRPB1O00241 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SIRPB1O00241 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SIRPB1O00241 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC19.91■□□□□ 0.78
SIRPB1O00241 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SIRPB1O00241 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SIRPB1O00241 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
SIRPB1O00241 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
SIRPB1O00241 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SIRPB1O00241 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
SIRPB1O00241 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SIRPB1O00241 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
SIRPB1O00241 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
SIRPB1O00241 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SIRPB1O00241 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SIRPB1O00241 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SIRPB1O00241 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SIRPB1O00241 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
SIRPB1O00241 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SIRPB1O00241 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
SIRPB1O00241 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SIRPB1O00241 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SIRPB1O00241 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SIRPB1O00241 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SIRPB1O00241 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SIRPB1O00241 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SIRPB1O00241 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SIRPB1O00241 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC19.89■□□□□ 0.77
SIRPB1O00241 HSD17B1P1-201ENST00000590052 955 ntBASIC19.89■□□□□ 0.77
SIRPB1O00241 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC19.89■□□□□ 0.77
SIRPB1O00241 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
SIRPB1O00241 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms