Protein–RNA interactions for Protein: O00206

TLR4, Toll-like receptor 4, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR4O00206 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC23.59■■□□□ 1.37
TLR4O00206 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC23.59■■□□□ 1.37
TLR4O00206 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC23.59■■□□□ 1.37
TLR4O00206 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
TLR4O00206 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC23.59■■□□□ 1.37
TLR4O00206 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC23.59■■□□□ 1.37
TLR4O00206 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
TLR4O00206 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
TLR4O00206 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
TLR4O00206 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.37
TLR4O00206 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC23.58■■□□□ 1.37
TLR4O00206 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
TLR4O00206 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
TLR4O00206 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC23.58■■□□□ 1.37
TLR4O00206 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
TLR4O00206 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC23.58■■□□□ 1.36
TLR4O00206 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
TLR4O00206 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
TLR4O00206 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC23.57■■□□□ 1.36
TLR4O00206 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC23.57■■□□□ 1.36
TLR4O00206 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
TLR4O00206 UNC93B8-201ENST00000511903 705 ntBASIC23.57■■□□□ 1.36
TLR4O00206 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC23.57■■□□□ 1.36
TLR4O00206 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
TLR4O00206 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC23.56■■□□□ 1.36
TLR4O00206 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC23.56■■□□□ 1.36
TLR4O00206 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
TLR4O00206 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC23.56■■□□□ 1.36
TLR4O00206 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC23.56■■□□□ 1.36
TLR4O00206 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC23.56■■□□□ 1.36
TLR4O00206 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
TLR4O00206 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC23.56■■□□□ 1.36
TLR4O00206 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC23.55■■□□□ 1.36
TLR4O00206 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC23.55■■□□□ 1.36
TLR4O00206 AC021242.3-201ENST00000607598 1377 ntBASIC23.55■■□□□ 1.36
TLR4O00206 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
TLR4O00206 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC23.55■■□□□ 1.36
TLR4O00206 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC23.55■■□□□ 1.36
TLR4O00206 AC019069.1-201ENST00000610008 1333 ntBASIC23.55■■□□□ 1.36
TLR4O00206 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC23.55■■□□□ 1.36
TLR4O00206 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
TLR4O00206 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
TLR4O00206 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
TLR4O00206 AC008406.3-201ENST00000620001 1374 ntBASIC23.54■■□□□ 1.36
TLR4O00206 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC23.54■■□□□ 1.36
TLR4O00206 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC23.54■■□□□ 1.36
TLR4O00206 KRT16P3-201ENST00000439127 1283 ntBASIC23.54■■□□□ 1.36
TLR4O00206 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC23.53■■□□□ 1.36
TLR4O00206 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC23.53■■□□□ 1.36
TLR4O00206 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC23.53■■□□□ 1.36
TLR4O00206 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC23.53■■□□□ 1.36
TLR4O00206 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC23.53■■□□□ 1.36
TLR4O00206 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC23.53■■□□□ 1.36
TLR4O00206 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
TLR4O00206 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC23.53■■□□□ 1.36
TLR4O00206 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
TLR4O00206 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC23.53■■□□□ 1.36
TLR4O00206 CREM-210ENST00000374721 2020 ntTSL 5 BASIC23.53■■□□□ 1.36
TLR4O00206 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC23.52■■□□□ 1.36
TLR4O00206 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
TLR4O00206 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
TLR4O00206 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
TLR4O00206 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
TLR4O00206 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
TLR4O00206 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC23.51■■□□□ 1.35
TLR4O00206 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
TLR4O00206 TSPY9P-201ENST00000440215 945 ntBASIC23.51■■□□□ 1.35
TLR4O00206 TSPY11P-201ENST00000442607 1045 ntBASIC23.51■■□□□ 1.35
TLR4O00206 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC23.51■■□□□ 1.35
TLR4O00206 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC23.51■■□□□ 1.35
TLR4O00206 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
TLR4O00206 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
TLR4O00206 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
TLR4O00206 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC23.5■■□□□ 1.35
TLR4O00206 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC23.5■■□□□ 1.35
TLR4O00206 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
TLR4O00206 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC23.5■■□□□ 1.35
TLR4O00206 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC23.5■■□□□ 1.35
TLR4O00206 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
TLR4O00206 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC23.5■■□□□ 1.35
TLR4O00206 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
TLR4O00206 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
TLR4O00206 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
TLR4O00206 SNAI3-AS1-204ENST00000567997 2048 ntBASIC23.49■■□□□ 1.35
TLR4O00206 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC23.49■■□□□ 1.35
TLR4O00206 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC23.49■■□□□ 1.35
TLR4O00206 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC23.48■■□□□ 1.35
TLR4O00206 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
TLR4O00206 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC23.48■■□□□ 1.35
TLR4O00206 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC23.48■■□□□ 1.35
TLR4O00206 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC23.48■■□□□ 1.35
TLR4O00206 MIR4281-201ENST00000580852 62 ntBASIC23.48■■□□□ 1.35
TLR4O00206 AC092028.1-203ENST00000608262 953 ntBASIC23.48■■□□□ 1.35
TLR4O00206 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
TLR4O00206 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
TLR4O00206 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC23.47■■□□□ 1.35
TLR4O00206 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
TLR4O00206 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC23.47■■□□□ 1.35
TLR4O00206 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
TLR4O00206 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms