Protein–RNA interactions for Protein: A6NKU9

SPDYE3, Speedy protein E3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE3A6NKU9 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC27.17■■□□□ 1.94
SPDYE3A6NKU9 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC27.17■■□□□ 1.94
SPDYE3A6NKU9 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC27.17■■□□□ 1.94
SPDYE3A6NKU9 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC27.17■■□□□ 1.94
SPDYE3A6NKU9 AC091060.1-201ENST00000623524 1766 ntBASIC27.17■■□□□ 1.94
SPDYE3A6NKU9 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC27.16■■□□□ 1.94
SPDYE3A6NKU9 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
SPDYE3A6NKU9 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
SPDYE3A6NKU9 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC27.15■■□□□ 1.94
SPDYE3A6NKU9 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC27.15■■□□□ 1.94
SPDYE3A6NKU9 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC27.15■■□□□ 1.94
SPDYE3A6NKU9 AC097639.1-201ENST00000565519 1891 ntBASIC27.15■■□□□ 1.94
SPDYE3A6NKU9 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC27.14■■□□□ 1.94
SPDYE3A6NKU9 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
SPDYE3A6NKU9 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC27.14■■□□□ 1.94
SPDYE3A6NKU9 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC27.14■■□□□ 1.94
SPDYE3A6NKU9 AC022616.5-201ENST00000518796 181 ntBASIC27.14■■□□□ 1.94
SPDYE3A6NKU9 DUSP8P4-201ENST00000399538 1761 ntBASIC27.14■■□□□ 1.93
SPDYE3A6NKU9 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
SPDYE3A6NKU9 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC27.13■■□□□ 1.93
SPDYE3A6NKU9 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
SPDYE3A6NKU9 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
SPDYE3A6NKU9 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
SPDYE3A6NKU9 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC27.13■■□□□ 1.93
SPDYE3A6NKU9 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
SPDYE3A6NKU9 AC145676.1-201ENST00000514988 2004 ntBASIC27.12■■□□□ 1.93
SPDYE3A6NKU9 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC27.12■■□□□ 1.93
SPDYE3A6NKU9 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
SPDYE3A6NKU9 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC27.11■■□□□ 1.93
SPDYE3A6NKU9 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC27.11■■□□□ 1.93
SPDYE3A6NKU9 AC103724.3-201ENST00000564481 992 ntBASIC27.11■■□□□ 1.93
SPDYE3A6NKU9 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
SPDYE3A6NKU9 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
SPDYE3A6NKU9 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
SPDYE3A6NKU9 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC27.1■■□□□ 1.93
SPDYE3A6NKU9 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
SPDYE3A6NKU9 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
SPDYE3A6NKU9 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
SPDYE3A6NKU9 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
SPDYE3A6NKU9 AL592295.1-201ENST00000400984 884 ntBASIC27.09■■□□□ 1.93
SPDYE3A6NKU9 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC27.09■■□□□ 1.93
SPDYE3A6NKU9 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC27.09■■□□□ 1.93
SPDYE3A6NKU9 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
SPDYE3A6NKU9 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC27.09■■□□□ 1.93
SPDYE3A6NKU9 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC27.08■■□□□ 1.93
SPDYE3A6NKU9 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC27.08■■□□□ 1.93
SPDYE3A6NKU9 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
SPDYE3A6NKU9 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC27.08■■□□□ 1.93
SPDYE3A6NKU9 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC27.08■■□□□ 1.93
SPDYE3A6NKU9 AL451085.2-201ENST00000605085 799 ntBASIC27.08■■□□□ 1.93
SPDYE3A6NKU9 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC27.08■■□□□ 1.93
SPDYE3A6NKU9 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC27.08■■□□□ 1.93
SPDYE3A6NKU9 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC27.08■■□□□ 1.93
SPDYE3A6NKU9 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
SPDYE3A6NKU9 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC27.08■■□□□ 1.92
SPDYE3A6NKU9 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC27.07■■□□□ 1.92
SPDYE3A6NKU9 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC27.07■■□□□ 1.92
SPDYE3A6NKU9 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
SPDYE3A6NKU9 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC27.07■■□□□ 1.92
SPDYE3A6NKU9 AL031848.2-201ENST00000607670 837 ntBASIC27.07■■□□□ 1.92
SPDYE3A6NKU9 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
SPDYE3A6NKU9 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC27.06■■□□□ 1.92
SPDYE3A6NKU9 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC27.06■■□□□ 1.92
SPDYE3A6NKU9 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC27.06■■□□□ 1.92
SPDYE3A6NKU9 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC27.06■■□□□ 1.92
SPDYE3A6NKU9 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC27.06■■□□□ 1.92
SPDYE3A6NKU9 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
SPDYE3A6NKU9 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC27.05■■□□□ 1.92
SPDYE3A6NKU9 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC27.05■■□□□ 1.92
SPDYE3A6NKU9 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC27.05■■□□□ 1.92
SPDYE3A6NKU9 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
SPDYE3A6NKU9 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
SPDYE3A6NKU9 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
SPDYE3A6NKU9 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
SPDYE3A6NKU9 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC27.04■■□□□ 1.92
SPDYE3A6NKU9 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC27.04■■□□□ 1.92
SPDYE3A6NKU9 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC27.04■■□□□ 1.92
SPDYE3A6NKU9 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC27.04■■□□□ 1.92
SPDYE3A6NKU9 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
SPDYE3A6NKU9 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
SPDYE3A6NKU9 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
SPDYE3A6NKU9 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC27.04■■□□□ 1.92
SPDYE3A6NKU9 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
SPDYE3A6NKU9 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC27.03■■□□□ 1.92
SPDYE3A6NKU9 FOXO3B-201ENST00000395675 1928 ntBASIC27.03■■□□□ 1.92
SPDYE3A6NKU9 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
SPDYE3A6NKU9 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC27.02■■□□□ 1.92
SPDYE3A6NKU9 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
SPDYE3A6NKU9 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
SPDYE3A6NKU9 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
SPDYE3A6NKU9 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
SPDYE3A6NKU9 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
SPDYE3A6NKU9 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC27.01■■□□□ 1.91
SPDYE3A6NKU9 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC27■■□□□ 1.91
SPDYE3A6NKU9 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC27■■□□□ 1.91
SPDYE3A6NKU9 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC27■■□□□ 1.91
SPDYE3A6NKU9 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
SPDYE3A6NKU9 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
SPDYE3A6NKU9 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC27■■□□□ 1.91
SPDYE3A6NKU9 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC27■■□□□ 1.91
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms