Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
LINC01546A6NGU7 CHML-205ENST00000638160 705 ntTSL 3 BASIC16.9■□□□□ 0.3
LINC01546A6NGU7 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LINC01546A6NGU7 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
LINC01546A6NGU7 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
LINC01546A6NGU7 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LINC01546A6NGU7 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LINC01546A6NGU7 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LINC01546A6NGU7 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LINC01546A6NGU7 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC16.89■□□□□ 0.29
LINC01546A6NGU7 C9orf163-202ENST00000624034 2573 ntBASIC16.89■□□□□ 0.29
LINC01546A6NGU7 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC16.89■□□□□ 0.29
LINC01546A6NGU7 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LINC01546A6NGU7 SHD-204ENST00000599689 1729 ntTSL 5 BASIC16.88■□□□□ 0.29
LINC01546A6NGU7 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC16.88■□□□□ 0.29
LINC01546A6NGU7 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LINC01546A6NGU7 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
LINC01546A6NGU7 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LINC01546A6NGU7 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LINC01546A6NGU7 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LINC01546A6NGU7 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LINC01546A6NGU7 ABCB10P4-201ENST00000566803 2184 ntBASIC16.88■□□□□ 0.29
LINC01546A6NGU7 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LINC01546A6NGU7 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LINC01546A6NGU7 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC16.87■□□□□ 0.29
LINC01546A6NGU7 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC16.87■□□□□ 0.29
LINC01546A6NGU7 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC16.87■□□□□ 0.29
LINC01546A6NGU7 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC16.86■□□□□ 0.29
LINC01546A6NGU7 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
LINC01546A6NGU7 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LINC01546A6NGU7 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
LINC01546A6NGU7 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LINC01546A6NGU7 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
LINC01546A6NGU7 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LINC01546A6NGU7 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
LINC01546A6NGU7 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LINC01546A6NGU7 RPS2-210ENST00000530225 765 ntTSL 2 BASIC16.86■□□□□ 0.29
LINC01546A6NGU7 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC16.86■□□□□ 0.29
LINC01546A6NGU7 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LINC01546A6NGU7 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC16.85■□□□□ 0.29
LINC01546A6NGU7 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
LINC01546A6NGU7 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
LINC01546A6NGU7 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
LINC01546A6NGU7 GALC-202ENST00000393568 2054 ntTSL 2 BASIC16.85■□□□□ 0.29
LINC01546A6NGU7 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC16.85■□□□□ 0.29
LINC01546A6NGU7 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LINC01546A6NGU7 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC16.84■□□□□ 0.29
LINC01546A6NGU7 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC16.84■□□□□ 0.29
LINC01546A6NGU7 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC16.84■□□□□ 0.29
LINC01546A6NGU7 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC16.84■□□□□ 0.29
LINC01546A6NGU7 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
LINC01546A6NGU7 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
LINC01546A6NGU7 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LINC01546A6NGU7 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
LINC01546A6NGU7 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC16.84■□□□□ 0.29
LINC01546A6NGU7 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LINC01546A6NGU7 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LINC01546A6NGU7 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
LINC01546A6NGU7 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC16.83■□□□□ 0.29
LINC01546A6NGU7 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LINC01546A6NGU7 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LINC01546A6NGU7 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
LINC01546A6NGU7 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LINC01546A6NGU7 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LINC01546A6NGU7 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
LINC01546A6NGU7 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC16.83■□□□□ 0.28
LINC01546A6NGU7 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
LINC01546A6NGU7 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
LINC01546A6NGU7 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LINC01546A6NGU7 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
LINC01546A6NGU7 LINC00565-201ENST00000562710 2331 ntBASIC16.82■□□□□ 0.28
LINC01546A6NGU7 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
LINC01546A6NGU7 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC16.82■□□□□ 0.28
LINC01546A6NGU7 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LINC01546A6NGU7 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LINC01546A6NGU7 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
LINC01546A6NGU7 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC16.82■□□□□ 0.28
LINC01546A6NGU7 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LINC01546A6NGU7 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LINC01546A6NGU7 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LINC01546A6NGU7 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LINC01546A6NGU7 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
LINC01546A6NGU7 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LINC01546A6NGU7 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
LINC01546A6NGU7 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LINC01546A6NGU7 AC233723.2-201ENST00000623798 2106 ntBASIC16.81■□□□□ 0.28
LINC01546A6NGU7 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC16.81■□□□□ 0.28
LINC01546A6NGU7 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC16.81■□□□□ 0.28
LINC01546A6NGU7 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LINC01546A6NGU7 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
LINC01546A6NGU7 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LINC01546A6NGU7 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LINC01546A6NGU7 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LINC01546A6NGU7 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LINC01546A6NGU7 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LINC01546A6NGU7 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LINC01546A6NGU7 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LINC01546A6NGU7 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC16.8■□□□□ 0.28
LINC01546A6NGU7 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC16.8■□□□□ 0.28
LINC01546A6NGU7 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms