Protein–RNA interactions for Protein: A0A075B6N2

TRBV20-1, T-cell receptor beta variable 20-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV20-1A0A075B6N2 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRBV20-1A0A075B6N2 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRBV20-1A0A075B6N2 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC15.91■□□□□ 0.14
TRBV20-1A0A075B6N2 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRBV20-1A0A075B6N2 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
TRBV20-1A0A075B6N2 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRBV20-1A0A075B6N2 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRBV20-1A0A075B6N2 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TRBV20-1A0A075B6N2 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
TRBV20-1A0A075B6N2 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC15.9■□□□□ 0.14
TRBV20-1A0A075B6N2 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRBV20-1A0A075B6N2 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRBV20-1A0A075B6N2 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRBV20-1A0A075B6N2 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TRBV20-1A0A075B6N2 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRBV20-1A0A075B6N2 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC15.9■□□□□ 0.14
TRBV20-1A0A075B6N2 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC15.9■□□□□ 0.14
TRBV20-1A0A075B6N2 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
TRBV20-1A0A075B6N2 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
TRBV20-1A0A075B6N2 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRBV20-1A0A075B6N2 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRBV20-1A0A075B6N2 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.14
TRBV20-1A0A075B6N2 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TRBV20-1A0A075B6N2 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TRBV20-1A0A075B6N2 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRBV20-1A0A075B6N2 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TRBV20-1A0A075B6N2 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRBV20-1A0A075B6N2 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRBV20-1A0A075B6N2 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRBV20-1A0A075B6N2 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC15.89■□□□□ 0.13
TRBV20-1A0A075B6N2 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRBV20-1A0A075B6N2 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
TRBV20-1A0A075B6N2 C9orf163-202ENST00000624034 2573 ntBASIC15.88■□□□□ 0.13
TRBV20-1A0A075B6N2 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRBV20-1A0A075B6N2 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRBV20-1A0A075B6N2 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRBV20-1A0A075B6N2 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC15.88■□□□□ 0.13
TRBV20-1A0A075B6N2 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRBV20-1A0A075B6N2 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
TRBV20-1A0A075B6N2 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC15.88■□□□□ 0.13
TRBV20-1A0A075B6N2 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRBV20-1A0A075B6N2 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRBV20-1A0A075B6N2 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC15.87■□□□□ 0.13
TRBV20-1A0A075B6N2 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC15.87■□□□□ 0.13
TRBV20-1A0A075B6N2 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRBV20-1A0A075B6N2 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRBV20-1A0A075B6N2 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRBV20-1A0A075B6N2 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRBV20-1A0A075B6N2 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
TRBV20-1A0A075B6N2 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRBV20-1A0A075B6N2 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRBV20-1A0A075B6N2 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC15.86■□□□□ 0.13
TRBV20-1A0A075B6N2 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
TRBV20-1A0A075B6N2 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TRBV20-1A0A075B6N2 AP003733.4-201ENST00000623785 1697 ntBASIC15.86■□□□□ 0.13
TRBV20-1A0A075B6N2 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRBV20-1A0A075B6N2 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRBV20-1A0A075B6N2 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
TRBV20-1A0A075B6N2 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TRBV20-1A0A075B6N2 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC15.86■□□□□ 0.13
TRBV20-1A0A075B6N2 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRBV20-1A0A075B6N2 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRBV20-1A0A075B6N2 EP400NL-214ENST00000641289 2402 ntBASIC15.85■□□□□ 0.13
TRBV20-1A0A075B6N2 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC15.85■□□□□ 0.13
TRBV20-1A0A075B6N2 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRBV20-1A0A075B6N2 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRBV20-1A0A075B6N2 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRBV20-1A0A075B6N2 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
TRBV20-1A0A075B6N2 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRBV20-1A0A075B6N2 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TRBV20-1A0A075B6N2 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRBV20-1A0A075B6N2 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRBV20-1A0A075B6N2 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRBV20-1A0A075B6N2 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC15.84■□□□□ 0.13
TRBV20-1A0A075B6N2 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC15.84■□□□□ 0.13
TRBV20-1A0A075B6N2 AC141586.4-201ENST00000624558 1573 ntBASIC15.84■□□□□ 0.13
TRBV20-1A0A075B6N2 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC15.84■□□□□ 0.13
TRBV20-1A0A075B6N2 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
TRBV20-1A0A075B6N2 AC015813.7-201ENST00000623294 581 ntBASIC15.84■□□□□ 0.13
TRBV20-1A0A075B6N2 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRBV20-1A0A075B6N2 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC15.84■□□□□ 0.13
TRBV20-1A0A075B6N2 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRBV20-1A0A075B6N2 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRBV20-1A0A075B6N2 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
TRBV20-1A0A075B6N2 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
TRBV20-1A0A075B6N2 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC15.83■□□□□ 0.13
TRBV20-1A0A075B6N2 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
TRBV20-1A0A075B6N2 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
TRBV20-1A0A075B6N2 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRBV20-1A0A075B6N2 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
TRBV20-1A0A075B6N2 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
TRBV20-1A0A075B6N2 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRBV20-1A0A075B6N2 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRBV20-1A0A075B6N2 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRBV20-1A0A075B6N2 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRBV20-1A0A075B6N2 AC127496.7-201ENST00000625110 1798 ntBASIC15.82■□□□□ 0.12
TRBV20-1A0A075B6N2 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRBV20-1A0A075B6N2 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRBV20-1A0A075B6N2 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRBV20-1A0A075B6N2 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms