Protein–RNA interactions for Protein: Q9Y6D6

ARFGEF1, Brefeldin A-inhibited guanine nucleotide-exchange protein 1, humanhuman

Predictions only

Length 1,849 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1Q9Y6D6 AC005332.8-201ENST00000622750 2735 ntBASIC19.73■□□□□ 0.75
ARFGEF1Q9Y6D6 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ARFGEF1Q9Y6D6 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC19.73■□□□□ 0.75
ARFGEF1Q9Y6D6 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ARFGEF1Q9Y6D6 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
ARFGEF1Q9Y6D6 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC19.73■□□□□ 0.75
ARFGEF1Q9Y6D6 TOMM22P5-201ENST00000416399 439 ntBASIC19.73■□□□□ 0.75
ARFGEF1Q9Y6D6 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC19.73■□□□□ 0.75
ARFGEF1Q9Y6D6 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC19.73■□□□□ 0.75
ARFGEF1Q9Y6D6 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC19.73■□□□□ 0.75
ARFGEF1Q9Y6D6 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC19.73■□□□□ 0.75
ARFGEF1Q9Y6D6 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
ARFGEF1Q9Y6D6 MIR4321-201ENST00000592276 80 ntBASIC19.73■□□□□ 0.75
ARFGEF1Q9Y6D6 AC005252.2-201ENST00000624630 1141 ntBASIC19.73■□□□□ 0.75
ARFGEF1Q9Y6D6 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
ARFGEF1Q9Y6D6 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ARFGEF1Q9Y6D6 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
ARFGEF1Q9Y6D6 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
ARFGEF1Q9Y6D6 GRN-214ENST00000589265 1632 ntTSL 5 BASIC19.73■□□□□ 0.75
ARFGEF1Q9Y6D6 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
ARFGEF1Q9Y6D6 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
ARFGEF1Q9Y6D6 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
ARFGEF1Q9Y6D6 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ARFGEF1Q9Y6D6 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
ARFGEF1Q9Y6D6 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
ARFGEF1Q9Y6D6 AL645608.8-201ENST00000606034 2086 ntBASIC19.73■□□□□ 0.75
ARFGEF1Q9Y6D6 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
ARFGEF1Q9Y6D6 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ARFGEF1Q9Y6D6 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
ARFGEF1Q9Y6D6 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC19.72■□□□□ 0.75
ARFGEF1Q9Y6D6 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC19.72■□□□□ 0.75
ARFGEF1Q9Y6D6 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC19.72■□□□□ 0.75
ARFGEF1Q9Y6D6 RPS2P36-201ENST00000456516 831 ntBASIC19.72■□□□□ 0.75
ARFGEF1Q9Y6D6 AL022328.3-201ENST00000607943 679 ntBASIC19.72■□□□□ 0.75
ARFGEF1Q9Y6D6 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
ARFGEF1Q9Y6D6 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC19.72■□□□□ 0.75
ARFGEF1Q9Y6D6 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
ARFGEF1Q9Y6D6 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ARFGEF1Q9Y6D6 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
ARFGEF1Q9Y6D6 KRT8P19-201ENST00000551916 1455 ntBASIC19.72■□□□□ 0.75
ARFGEF1Q9Y6D6 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ARFGEF1Q9Y6D6 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC19.72■□□□□ 0.75
ARFGEF1Q9Y6D6 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ARFGEF1Q9Y6D6 REEP1-202ENST00000453231 940 ntTSL 2 BASIC19.72■□□□□ 0.75
ARFGEF1Q9Y6D6 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ARFGEF1Q9Y6D6 CHMP4BP1-201ENST00000556017 588 ntBASIC19.72■□□□□ 0.75
ARFGEF1Q9Y6D6 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC19.72■□□□□ 0.75
ARFGEF1Q9Y6D6 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC19.72■□□□□ 0.75
ARFGEF1Q9Y6D6 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ARFGEF1Q9Y6D6 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ARFGEF1Q9Y6D6 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC19.71■□□□□ 0.75
ARFGEF1Q9Y6D6 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC19.71■□□□□ 0.75
ARFGEF1Q9Y6D6 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ARFGEF1Q9Y6D6 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC19.71■□□□□ 0.75
ARFGEF1Q9Y6D6 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ARFGEF1Q9Y6D6 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ARFGEF1Q9Y6D6 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
ARFGEF1Q9Y6D6 GGT4P-201ENST00000623672 1708 ntBASIC19.71■□□□□ 0.75
ARFGEF1Q9Y6D6 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ARFGEF1Q9Y6D6 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
ARFGEF1Q9Y6D6 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
ARFGEF1Q9Y6D6 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ARFGEF1Q9Y6D6 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC19.71■□□□□ 0.75
ARFGEF1Q9Y6D6 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC19.71■□□□□ 0.75
ARFGEF1Q9Y6D6 ARTN-209ENST00000479128 471 ntTSL 3 BASIC19.71■□□□□ 0.75
ARFGEF1Q9Y6D6 HCG18-245ENST00000602550 559 ntTSL 4 BASIC19.71■□□□□ 0.75
ARFGEF1Q9Y6D6 AC008687.7-202ENST00000637404 953 ntBASIC19.71■□□□□ 0.75
ARFGEF1Q9Y6D6 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.71■□□□□ 0.75
ARFGEF1Q9Y6D6 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ARFGEF1Q9Y6D6 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ARFGEF1Q9Y6D6 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC19.71■□□□□ 0.75
ARFGEF1Q9Y6D6 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC19.71■□□□□ 0.75
ARFGEF1Q9Y6D6 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC19.71■□□□□ 0.74
ARFGEF1Q9Y6D6 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC19.71■□□□□ 0.74
ARFGEF1Q9Y6D6 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ARFGEF1Q9Y6D6 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC19.7■□□□□ 0.74
ARFGEF1Q9Y6D6 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ARFGEF1Q9Y6D6 GPAA1P2-202ENST00000606848 1787 ntBASIC19.7■□□□□ 0.74
ARFGEF1Q9Y6D6 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ARFGEF1Q9Y6D6 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ARFGEF1Q9Y6D6 GGCT-203ENST00000409144 836 ntTSL 2 BASIC19.7■□□□□ 0.74
ARFGEF1Q9Y6D6 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ARFGEF1Q9Y6D6 NUS1P3-201ENST00000423502 862 ntBASIC19.7■□□□□ 0.74
ARFGEF1Q9Y6D6 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ARFGEF1Q9Y6D6 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC19.7■□□□□ 0.74
ARFGEF1Q9Y6D6 EIF4HP1-201ENST00000453115 687 ntBASIC19.7■□□□□ 0.74
ARFGEF1Q9Y6D6 RPL13AP25-201ENST00000484130 612 ntBASIC19.7■□□□□ 0.74
ARFGEF1Q9Y6D6 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ARFGEF1Q9Y6D6 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC19.7■□□□□ 0.74
ARFGEF1Q9Y6D6 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
ARFGEF1Q9Y6D6 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC19.7■□□□□ 0.74
ARFGEF1Q9Y6D6 RELA-227ENST00000615805 2236 ntTSL 5 BASIC19.7■□□□□ 0.74
ARFGEF1Q9Y6D6 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ARFGEF1Q9Y6D6 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC19.7■□□□□ 0.74
ARFGEF1Q9Y6D6 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ARFGEF1Q9Y6D6 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ARFGEF1Q9Y6D6 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC19.7■□□□□ 0.74
ARFGEF1Q9Y6D6 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ARFGEF1Q9Y6D6 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC19.69■□□□□ 0.74
ARFGEF1Q9Y6D6 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms