Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC18.99■□□□□ 0.63
CTDP1Q9Y5B0 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
CTDP1Q9Y5B0 AL589739.1-201ENST00000607720 493 ntBASIC18.99■□□□□ 0.63
CTDP1Q9Y5B0 SPDYE12P-201ENST00000618416 771 ntBASIC18.99■□□□□ 0.63
CTDP1Q9Y5B0 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
CTDP1Q9Y5B0 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CTDP1Q9Y5B0 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
CTDP1Q9Y5B0 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CTDP1Q9Y5B0 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CTDP1Q9Y5B0 CETN4P-206ENST00000642099 2168 ntBASIC18.99■□□□□ 0.63
CTDP1Q9Y5B0 FOXO1B-201ENST00000504678 1527 ntBASIC18.99■□□□□ 0.63
CTDP1Q9Y5B0 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.99■□□□□ 0.63
CTDP1Q9Y5B0 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
CTDP1Q9Y5B0 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CTDP1Q9Y5B0 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CTDP1Q9Y5B0 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC18.98■□□□□ 0.63
CTDP1Q9Y5B0 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
CTDP1Q9Y5B0 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC18.98■□□□□ 0.63
CTDP1Q9Y5B0 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CTDP1Q9Y5B0 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC18.98■□□□□ 0.63
CTDP1Q9Y5B0 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CTDP1Q9Y5B0 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CTDP1Q9Y5B0 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CTDP1Q9Y5B0 KLK8-202ENST00000320838 456 ntTSL 5 BASIC18.98■□□□□ 0.63
CTDP1Q9Y5B0 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC18.98■□□□□ 0.63
CTDP1Q9Y5B0 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC18.98■□□□□ 0.63
CTDP1Q9Y5B0 SATB1-217ENST00000493952 626 ntTSL 3 BASIC18.98■□□□□ 0.63
CTDP1Q9Y5B0 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
CTDP1Q9Y5B0 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC18.98■□□□□ 0.63
CTDP1Q9Y5B0 AL138828.2-201ENST00000615812 383 ntBASIC18.98■□□□□ 0.63
CTDP1Q9Y5B0 AL590560.3-201ENST00000623350 461 ntBASIC18.98■□□□□ 0.63
CTDP1Q9Y5B0 AC008761.3-201ENST00000624803 892 ntBASIC18.98■□□□□ 0.63
CTDP1Q9Y5B0 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
CTDP1Q9Y5B0 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CTDP1Q9Y5B0 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
CTDP1Q9Y5B0 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CTDP1Q9Y5B0 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
CTDP1Q9Y5B0 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
CTDP1Q9Y5B0 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CTDP1Q9Y5B0 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CTDP1Q9Y5B0 AC060834.1-201ENST00000443027 2032 ntBASIC18.98■□□□□ 0.63
CTDP1Q9Y5B0 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC18.98■□□□□ 0.63
CTDP1Q9Y5B0 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CTDP1Q9Y5B0 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CTDP1Q9Y5B0 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC18.97■□□□□ 0.63
CTDP1Q9Y5B0 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CTDP1Q9Y5B0 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC18.97■□□□□ 0.63
CTDP1Q9Y5B0 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC18.97■□□□□ 0.63
CTDP1Q9Y5B0 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
CTDP1Q9Y5B0 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
CTDP1Q9Y5B0 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CTDP1Q9Y5B0 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CTDP1Q9Y5B0 AL645728.1-201ENST00000366221 2101 ntBASIC18.97■□□□□ 0.63
CTDP1Q9Y5B0 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CTDP1Q9Y5B0 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CTDP1Q9Y5B0 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CTDP1Q9Y5B0 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
CTDP1Q9Y5B0 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC18.97■□□□□ 0.63
CTDP1Q9Y5B0 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC18.97■□□□□ 0.63
CTDP1Q9Y5B0 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
CTDP1Q9Y5B0 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC18.97■□□□□ 0.63
CTDP1Q9Y5B0 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC18.97■□□□□ 0.63
CTDP1Q9Y5B0 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC18.97■□□□□ 0.63
CTDP1Q9Y5B0 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC18.97■□□□□ 0.63
CTDP1Q9Y5B0 AC024267.1-201ENST00000582320 895 ntBASIC18.97■□□□□ 0.63
CTDP1Q9Y5B0 YTHDF3-AS1-201ENST00000603538 718 ntBASIC18.97■□□□□ 0.63
CTDP1Q9Y5B0 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
CTDP1Q9Y5B0 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CTDP1Q9Y5B0 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
CTDP1Q9Y5B0 GOLGA2P9-201ENST00000596977 1937 ntBASIC18.97■□□□□ 0.63
CTDP1Q9Y5B0 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CTDP1Q9Y5B0 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
CTDP1Q9Y5B0 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
CTDP1Q9Y5B0 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CTDP1Q9Y5B0 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CTDP1Q9Y5B0 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
CTDP1Q9Y5B0 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CTDP1Q9Y5B0 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC18.97■□□□□ 0.63
CTDP1Q9Y5B0 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CTDP1Q9Y5B0 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CTDP1Q9Y5B0 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
CTDP1Q9Y5B0 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CTDP1Q9Y5B0 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CTDP1Q9Y5B0 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC18.96■□□□□ 0.63
CTDP1Q9Y5B0 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
CTDP1Q9Y5B0 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CTDP1Q9Y5B0 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CTDP1Q9Y5B0 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC18.96■□□□□ 0.63
CTDP1Q9Y5B0 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CTDP1Q9Y5B0 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
CTDP1Q9Y5B0 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CTDP1Q9Y5B0 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC18.96■□□□□ 0.63
CTDP1Q9Y5B0 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CTDP1Q9Y5B0 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
CTDP1Q9Y5B0 EDF1-203ENST00000371649 790 ntTSL 2 BASIC18.96■□□□□ 0.63
CTDP1Q9Y5B0 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
CTDP1Q9Y5B0 VMO1-203ENST00000416307 712 ntTSL 2 BASIC18.96■□□□□ 0.63
CTDP1Q9Y5B0 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC18.96■□□□□ 0.63
CTDP1Q9Y5B0 HLA-V-204ENST00000476601 1289 ntBASIC18.96■□□□□ 0.63
CTDP1Q9Y5B0 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms