Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 P4HB-223ENST00000576390 439 ntTSL 4 BASIC15.62■□□□□ 0.09
AP4S1Q9Y587 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC15.62■□□□□ 0.09
AP4S1Q9Y587 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
AP4S1Q9Y587 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
AP4S1Q9Y587 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
AP4S1Q9Y587 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC15.62■□□□□ 0.09
AP4S1Q9Y587 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
AP4S1Q9Y587 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
AP4S1Q9Y587 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
AP4S1Q9Y587 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
AP4S1Q9Y587 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
AP4S1Q9Y587 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
AP4S1Q9Y587 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
AP4S1Q9Y587 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC15.62■□□□□ 0.09
AP4S1Q9Y587 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
AP4S1Q9Y587 KRT18P22-201ENST00000402024 1347 ntBASIC15.62■□□□□ 0.09
AP4S1Q9Y587 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC15.62■□□□□ 0.09
AP4S1Q9Y587 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
AP4S1Q9Y587 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
AP4S1Q9Y587 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
AP4S1Q9Y587 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
AP4S1Q9Y587 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
AP4S1Q9Y587 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC15.61■□□□□ 0.09
AP4S1Q9Y587 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
AP4S1Q9Y587 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC15.61■□□□□ 0.09
AP4S1Q9Y587 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
AP4S1Q9Y587 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
AP4S1Q9Y587 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
AP4S1Q9Y587 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC15.61■□□□□ 0.09
AP4S1Q9Y587 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
AP4S1Q9Y587 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
AP4S1Q9Y587 AL109954.1-202ENST00000564051 2148 ntBASIC15.61■□□□□ 0.09
AP4S1Q9Y587 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
AP4S1Q9Y587 AL161772.1-201ENST00000610494 4412 ntBASIC15.61■□□□□ 0.09
AP4S1Q9Y587 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
AP4S1Q9Y587 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
AP4S1Q9Y587 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC15.61■□□□□ 0.09
AP4S1Q9Y587 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
AP4S1Q9Y587 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
AP4S1Q9Y587 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
AP4S1Q9Y587 SIGLEC30P-201ENST00000455569 941 ntBASIC15.61■□□□□ 0.09
AP4S1Q9Y587 TSPY15P-201ENST00000457163 923 ntBASIC15.61■□□□□ 0.09
AP4S1Q9Y587 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
AP4S1Q9Y587 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
AP4S1Q9Y587 ABBA01031661.1-201ENST00000634362 1253 ntBASIC15.61■□□□□ 0.09
AP4S1Q9Y587 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC15.61■□□□□ 0.09
AP4S1Q9Y587 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
AP4S1Q9Y587 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC15.61■□□□□ 0.09
AP4S1Q9Y587 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
AP4S1Q9Y587 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
AP4S1Q9Y587 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
AP4S1Q9Y587 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
AP4S1Q9Y587 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
AP4S1Q9Y587 AC138035.3-201ENST00000622706 2791 ntBASIC15.61■□□□□ 0.09
AP4S1Q9Y587 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC15.61■□□□□ 0.09
AP4S1Q9Y587 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC15.61■□□□□ 0.09
AP4S1Q9Y587 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
AP4S1Q9Y587 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
AP4S1Q9Y587 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
AP4S1Q9Y587 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
AP4S1Q9Y587 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
AP4S1Q9Y587 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
AP4S1Q9Y587 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC15.61■□□□□ 0.09
AP4S1Q9Y587 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC15.61■□□□□ 0.09
AP4S1Q9Y587 AC020658.6-201ENST00000623564 1870 ntBASIC15.61■□□□□ 0.09
AP4S1Q9Y587 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC15.61■□□□□ 0.09
AP4S1Q9Y587 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC15.61■□□□□ 0.09
AP4S1Q9Y587 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC15.61■□□□□ 0.09
AP4S1Q9Y587 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC15.6■□□□□ 0.09
AP4S1Q9Y587 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
AP4S1Q9Y587 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
AP4S1Q9Y587 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC15.6■□□□□ 0.09
AP4S1Q9Y587 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
AP4S1Q9Y587 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
AP4S1Q9Y587 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
AP4S1Q9Y587 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
AP4S1Q9Y587 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
AP4S1Q9Y587 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC15.6■□□□□ 0.09
AP4S1Q9Y587 TMBIM7P-203ENST00000641617 1718 ntBASIC15.6■□□□□ 0.09
AP4S1Q9Y587 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
AP4S1Q9Y587 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
AP4S1Q9Y587 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
AP4S1Q9Y587 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
AP4S1Q9Y587 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
AP4S1Q9Y587 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC15.6■□□□□ 0.09
AP4S1Q9Y587 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
AP4S1Q9Y587 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
AP4S1Q9Y587 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
AP4S1Q9Y587 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
AP4S1Q9Y587 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC15.6■□□□□ 0.09
AP4S1Q9Y587 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
AP4S1Q9Y587 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
AP4S1Q9Y587 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
AP4S1Q9Y587 SLC25A3P1-201ENST00000443844 931 ntBASIC15.6■□□□□ 0.09
AP4S1Q9Y587 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC15.6■□□□□ 0.09
AP4S1Q9Y587 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
AP4S1Q9Y587 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
AP4S1Q9Y587 AC009533.2-201ENST00000543664 586 ntBASIC15.6■□□□□ 0.09
AP4S1Q9Y587 FGF14-AS2-201ENST00000606448 1074 ntBASIC15.6■□□□□ 0.09
AP4S1Q9Y587 AC124864.1-201ENST00000623408 392 ntBASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms