Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
NECTIN3Q9NQS3 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
NECTIN3Q9NQS3 AC024909.3-201ENST00000611513 2257 ntBASIC15.83■□□□□ 0.13
NECTIN3Q9NQS3 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
NECTIN3Q9NQS3 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
NECTIN3Q9NQS3 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NECTIN3Q9NQS3 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC15.83■□□□□ 0.12
NECTIN3Q9NQS3 HARS-203ENST00000431330 1774 ntTSL 2 BASIC15.83■□□□□ 0.12
NECTIN3Q9NQS3 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NECTIN3Q9NQS3 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
NECTIN3Q9NQS3 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NECTIN3Q9NQS3 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
NECTIN3Q9NQS3 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
NECTIN3Q9NQS3 PMP22-202ENST00000395936 816 ntTSL 3 BASIC15.83■□□□□ 0.12
NECTIN3Q9NQS3 COX10-202ENST00000429152 875 ntTSL 2 BASIC15.83■□□□□ 0.12
NECTIN3Q9NQS3 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC15.83■□□□□ 0.12
NECTIN3Q9NQS3 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC15.83■□□□□ 0.12
NECTIN3Q9NQS3 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
NECTIN3Q9NQS3 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC15.83■□□□□ 0.12
NECTIN3Q9NQS3 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
NECTIN3Q9NQS3 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC15.83■□□□□ 0.12
NECTIN3Q9NQS3 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC15.83■□□□□ 0.12
NECTIN3Q9NQS3 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC15.83■□□□□ 0.12
NECTIN3Q9NQS3 MPDU1-223ENST00000582151 728 ntBASIC15.83■□□□□ 0.12
NECTIN3Q9NQS3 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC15.83■□□□□ 0.12
NECTIN3Q9NQS3 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC15.83■□□□□ 0.12
NECTIN3Q9NQS3 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC15.83■□□□□ 0.12
NECTIN3Q9NQS3 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC15.83■□□□□ 0.12
NECTIN3Q9NQS3 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
NECTIN3Q9NQS3 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NECTIN3Q9NQS3 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
NECTIN3Q9NQS3 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC15.83■□□□□ 0.12
NECTIN3Q9NQS3 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC15.83■□□□□ 0.12
NECTIN3Q9NQS3 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
NECTIN3Q9NQS3 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
NECTIN3Q9NQS3 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NECTIN3Q9NQS3 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC15.83■□□□□ 0.12
NECTIN3Q9NQS3 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC15.83■□□□□ 0.12
NECTIN3Q9NQS3 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
NECTIN3Q9NQS3 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NECTIN3Q9NQS3 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
NECTIN3Q9NQS3 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NECTIN3Q9NQS3 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NECTIN3Q9NQS3 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NECTIN3Q9NQS3 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC15.82■□□□□ 0.12
NECTIN3Q9NQS3 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NECTIN3Q9NQS3 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NECTIN3Q9NQS3 AC078925.2-201ENST00000624013 1973 ntBASIC15.82■□□□□ 0.12
NECTIN3Q9NQS3 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NECTIN3Q9NQS3 AC104640.1-201ENST00000562617 2109 ntBASIC15.82■□□□□ 0.12
NECTIN3Q9NQS3 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC15.82■□□□□ 0.12
NECTIN3Q9NQS3 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NECTIN3Q9NQS3 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC15.82■□□□□ 0.12
NECTIN3Q9NQS3 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
NECTIN3Q9NQS3 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NECTIN3Q9NQS3 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NECTIN3Q9NQS3 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NECTIN3Q9NQS3 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
NECTIN3Q9NQS3 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NECTIN3Q9NQS3 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NECTIN3Q9NQS3 YBX2P1-201ENST00000394192 760 ntBASIC15.82■□□□□ 0.12
NECTIN3Q9NQS3 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
NECTIN3Q9NQS3 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
NECTIN3Q9NQS3 BX842568.4-201ENST00000421222 227 ntBASIC15.82■□□□□ 0.12
NECTIN3Q9NQS3 AC004832.2-201ENST00000426397 482 ntBASIC15.82■□□□□ 0.12
NECTIN3Q9NQS3 RPP21-221ENST00000428040 594 ntTSL 2 BASIC15.82■□□□□ 0.12
NECTIN3Q9NQS3 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NECTIN3Q9NQS3 SMN2-210ENST00000511812 867 ntTSL 2 BASIC15.82■□□□□ 0.12
NECTIN3Q9NQS3 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC15.82■□□□□ 0.12
NECTIN3Q9NQS3 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC15.82■□□□□ 0.12
NECTIN3Q9NQS3 AC092865.5-201ENST00000545435 363 ntBASIC15.82■□□□□ 0.12
NECTIN3Q9NQS3 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC15.82■□□□□ 0.12
NECTIN3Q9NQS3 PDPK2P-202ENST00000562415 1191 ntBASIC15.82■□□□□ 0.12
NECTIN3Q9NQS3 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC15.82■□□□□ 0.12
NECTIN3Q9NQS3 MIR4515-201ENST00000584082 81 ntBASIC15.82■□□□□ 0.12
NECTIN3Q9NQS3 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
NECTIN3Q9NQS3 AC023511.2-201ENST00000618803 211 ntBASIC15.82■□□□□ 0.12
NECTIN3Q9NQS3 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NECTIN3Q9NQS3 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
NECTIN3Q9NQS3 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NECTIN3Q9NQS3 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
NECTIN3Q9NQS3 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
NECTIN3Q9NQS3 FLJ16779-201ENST00000612722 7638 ntBASIC15.82■□□□□ 0.12
NECTIN3Q9NQS3 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NECTIN3Q9NQS3 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
NECTIN3Q9NQS3 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NECTIN3Q9NQS3 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
NECTIN3Q9NQS3 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC15.82■□□□□ 0.12
NECTIN3Q9NQS3 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NECTIN3Q9NQS3 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NECTIN3Q9NQS3 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
NECTIN3Q9NQS3 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC15.82■□□□□ 0.12
NECTIN3Q9NQS3 BID-213ENST00000615414 2236 ntTSL 5 BASIC15.82■□□□□ 0.12
NECTIN3Q9NQS3 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
NECTIN3Q9NQS3 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NECTIN3Q9NQS3 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC15.82■□□□□ 0.12
NECTIN3Q9NQS3 AC023824.1-201ENST00000562945 2975 ntBASIC15.81■□□□□ 0.12
NECTIN3Q9NQS3 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
NECTIN3Q9NQS3 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NECTIN3Q9NQS3 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms