Protein–RNA interactions for Protein: Q9H788

SH2D4A, SH2 domain-containing protein 4A, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4AQ9H788 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC19.13■□□□□ 0.65
SH2D4AQ9H788 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
SH2D4AQ9H788 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC19.13■□□□□ 0.65
SH2D4AQ9H788 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SH2D4AQ9H788 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC19.12■□□□□ 0.65
SH2D4AQ9H788 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SH2D4AQ9H788 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SH2D4AQ9H788 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SH2D4AQ9H788 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC19.12■□□□□ 0.65
SH2D4AQ9H788 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC19.12■□□□□ 0.65
SH2D4AQ9H788 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC19.12■□□□□ 0.65
SH2D4AQ9H788 AL589702.1-201ENST00000641229 1509 ntBASIC19.12■□□□□ 0.65
SH2D4AQ9H788 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC19.12■□□□□ 0.65
SH2D4AQ9H788 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SH2D4AQ9H788 AC087499.5-201ENST00000452760 1342 ntBASIC19.12■□□□□ 0.65
SH2D4AQ9H788 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SH2D4AQ9H788 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SH2D4AQ9H788 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC19.12■□□□□ 0.65
SH2D4AQ9H788 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC19.12■□□□□ 0.65
SH2D4AQ9H788 COX11-202ENST00000571584 1108 ntTSL 2 BASIC19.12■□□□□ 0.65
SH2D4AQ9H788 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
SH2D4AQ9H788 PRR29-209ENST00000582540 967 ntTSL 2 BASIC19.12■□□□□ 0.65
SH2D4AQ9H788 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC19.12■□□□□ 0.65
SH2D4AQ9H788 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC19.12■□□□□ 0.65
SH2D4AQ9H788 TEX28P1-201ENST00000613479 1221 ntBASIC19.12■□□□□ 0.65
SH2D4AQ9H788 TEX28P2-201ENST00000617764 1221 ntBASIC19.12■□□□□ 0.65
SH2D4AQ9H788 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SH2D4AQ9H788 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
SH2D4AQ9H788 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
SH2D4AQ9H788 GGT4P-201ENST00000623672 1708 ntBASIC19.11■□□□□ 0.65
SH2D4AQ9H788 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
SH2D4AQ9H788 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC19.11■□□□□ 0.65
SH2D4AQ9H788 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SH2D4AQ9H788 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC19.11■□□□□ 0.65
SH2D4AQ9H788 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SH2D4AQ9H788 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SH2D4AQ9H788 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC19.11■□□□□ 0.65
SH2D4AQ9H788 MRPS18AP1-201ENST00000414458 589 ntBASIC19.11■□□□□ 0.65
SH2D4AQ9H788 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC19.11■□□□□ 0.65
SH2D4AQ9H788 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC19.11■□□□□ 0.65
SH2D4AQ9H788 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC19.11■□□□□ 0.65
SH2D4AQ9H788 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SH2D4AQ9H788 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
SH2D4AQ9H788 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC19.11■□□□□ 0.65
SH2D4AQ9H788 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC19.11■□□□□ 0.65
SH2D4AQ9H788 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC19.11■□□□□ 0.65
SH2D4AQ9H788 BANF1P1-201ENST00000553684 263 ntBASIC19.11■□□□□ 0.65
SH2D4AQ9H788 COQ6-210ENST00000554920 649 ntTSL 3 BASIC19.11■□□□□ 0.65
SH2D4AQ9H788 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC19.11■□□□□ 0.65
SH2D4AQ9H788 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SH2D4AQ9H788 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SH2D4AQ9H788 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
SH2D4AQ9H788 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SH2D4AQ9H788 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
SH2D4AQ9H788 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SH2D4AQ9H788 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SH2D4AQ9H788 AMT-206ENST00000458307 1860 ntTSL 2 BASIC19.11■□□□□ 0.65
SH2D4AQ9H788 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
SH2D4AQ9H788 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC19.11■□□□□ 0.65
SH2D4AQ9H788 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC19.11■□□□□ 0.65
SH2D4AQ9H788 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SH2D4AQ9H788 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
SH2D4AQ9H788 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SH2D4AQ9H788 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SH2D4AQ9H788 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
SH2D4AQ9H788 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SH2D4AQ9H788 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SH2D4AQ9H788 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SH2D4AQ9H788 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SH2D4AQ9H788 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
SH2D4AQ9H788 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SH2D4AQ9H788 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SH2D4AQ9H788 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SH2D4AQ9H788 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SH2D4AQ9H788 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SH2D4AQ9H788 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SH2D4AQ9H788 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
SH2D4AQ9H788 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SH2D4AQ9H788 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
SH2D4AQ9H788 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SH2D4AQ9H788 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SH2D4AQ9H788 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SH2D4AQ9H788 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC19.1■□□□□ 0.65
SH2D4AQ9H788 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC19.1■□□□□ 0.65
SH2D4AQ9H788 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
SH2D4AQ9H788 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SH2D4AQ9H788 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SH2D4AQ9H788 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC19.1■□□□□ 0.65
SH2D4AQ9H788 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC19.1■□□□□ 0.65
SH2D4AQ9H788 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
SH2D4AQ9H788 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SH2D4AQ9H788 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
SH2D4AQ9H788 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SH2D4AQ9H788 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SH2D4AQ9H788 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC19.1■□□□□ 0.65
SH2D4AQ9H788 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
SH2D4AQ9H788 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC19.1■□□□□ 0.65
SH2D4AQ9H788 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC19.1■□□□□ 0.65
SH2D4AQ9H788 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
SH2D4AQ9H788 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 180.3 ms