Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RNF41Q9H4P4 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC19.37■□□□□ 0.69
RNF41Q9H4P4 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RNF41Q9H4P4 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RNF41Q9H4P4 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RNF41Q9H4P4 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RNF41Q9H4P4 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
RNF41Q9H4P4 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
RNF41Q9H4P4 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RNF41Q9H4P4 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
RNF41Q9H4P4 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RNF41Q9H4P4 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RNF41Q9H4P4 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RNF41Q9H4P4 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
RNF41Q9H4P4 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RNF41Q9H4P4 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RNF41Q9H4P4 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RNF41Q9H4P4 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
RNF41Q9H4P4 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC19.36■□□□□ 0.69
RNF41Q9H4P4 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RNF41Q9H4P4 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RNF41Q9H4P4 ALG1L8P-201ENST00000533887 760 ntBASIC19.36■□□□□ 0.69
RNF41Q9H4P4 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC19.36■□□□□ 0.69
RNF41Q9H4P4 LINC00628-201ENST00000628516 1289 ntBASIC19.36■□□□□ 0.69
RNF41Q9H4P4 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
RNF41Q9H4P4 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC19.36■□□□□ 0.69
RNF41Q9H4P4 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC19.36■□□□□ 0.69
RNF41Q9H4P4 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC19.36■□□□□ 0.69
RNF41Q9H4P4 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
RNF41Q9H4P4 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
RNF41Q9H4P4 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
RNF41Q9H4P4 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC19.36■□□□□ 0.69
RNF41Q9H4P4 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
RNF41Q9H4P4 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC19.36■□□□□ 0.69
RNF41Q9H4P4 AL592424.1-201ENST00000563624 1536 ntBASIC19.35■□□□□ 0.69
RNF41Q9H4P4 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RNF41Q9H4P4 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RNF41Q9H4P4 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RNF41Q9H4P4 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RNF41Q9H4P4 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RNF41Q9H4P4 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RNF41Q9H4P4 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RNF41Q9H4P4 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC19.35■□□□□ 0.69
RNF41Q9H4P4 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
RNF41Q9H4P4 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
RNF41Q9H4P4 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
RNF41Q9H4P4 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
RNF41Q9H4P4 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
RNF41Q9H4P4 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
RNF41Q9H4P4 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
RNF41Q9H4P4 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC19.35■□□□□ 0.69
RNF41Q9H4P4 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RNF41Q9H4P4 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RNF41Q9H4P4 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC19.35■□□□□ 0.69
RNF41Q9H4P4 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RNF41Q9H4P4 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RNF41Q9H4P4 AC092183.1-201ENST00000469884 875 ntBASIC19.35■□□□□ 0.69
RNF41Q9H4P4 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RNF41Q9H4P4 GATD1-206ENST00000526325 756 ntTSL 5 BASIC19.35■□□□□ 0.69
RNF41Q9H4P4 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RNF41Q9H4P4 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC19.35■□□□□ 0.69
RNF41Q9H4P4 AC024267.1-201ENST00000582320 895 ntBASIC19.35■□□□□ 0.69
RNF41Q9H4P4 AL365330.1-201ENST00000607459 531 ntBASIC19.35■□□□□ 0.69
RNF41Q9H4P4 AP001059.3-201ENST00000619053 235 ntBASIC19.35■□□□□ 0.69
RNF41Q9H4P4 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
RNF41Q9H4P4 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
RNF41Q9H4P4 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
RNF41Q9H4P4 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RNF41Q9H4P4 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
RNF41Q9H4P4 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
RNF41Q9H4P4 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RNF41Q9H4P4 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RNF41Q9H4P4 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC19.35■□□□□ 0.69
RNF41Q9H4P4 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RNF41Q9H4P4 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RNF41Q9H4P4 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC19.35■□□□□ 0.69
RNF41Q9H4P4 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC19.35■□□□□ 0.69
RNF41Q9H4P4 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RNF41Q9H4P4 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC19.35■□□□□ 0.69
RNF41Q9H4P4 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RNF41Q9H4P4 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RNF41Q9H4P4 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RNF41Q9H4P4 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RNF41Q9H4P4 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
RNF41Q9H4P4 KRT18P28-201ENST00000453838 1332 ntBASIC19.34■□□□□ 0.69
RNF41Q9H4P4 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC19.34■□□□□ 0.69
RNF41Q9H4P4 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RNF41Q9H4P4 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
RNF41Q9H4P4 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
RNF41Q9H4P4 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RNF41Q9H4P4 LBH-203ENST00000404397 543 ntTSL 4 BASIC19.34■□□□□ 0.69
RNF41Q9H4P4 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC19.34■□□□□ 0.69
RNF41Q9H4P4 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC19.34■□□□□ 0.69
RNF41Q9H4P4 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
RNF41Q9H4P4 AL512356.2-201ENST00000546955 174 ntBASIC19.34■□□□□ 0.69
RNF41Q9H4P4 RARRES2P9-201ENST00000565168 469 ntBASIC19.34■□□□□ 0.69
RNF41Q9H4P4 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC19.34■□□□□ 0.69
RNF41Q9H4P4 AP3S2-216ENST00000617003 1561 ntBASIC19.34■□□□□ 0.69
RNF41Q9H4P4 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
RNF41Q9H4P4 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms