Protein–RNA interactions for Protein: Q9BTD1

SHANK2-AS3, Putative uncharacterized protein SHANK2-AS3, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-AS3Q9BTD1 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SHANK2-AS3Q9BTD1 HIST2H3DP1-201ENST00000401004 416 ntBASIC12.71□□□□□ -0.37
SHANK2-AS3Q9BTD1 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SHANK2-AS3Q9BTD1 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC12.71□□□□□ -0.37
SHANK2-AS3Q9BTD1 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC12.71□□□□□ -0.37
SHANK2-AS3Q9BTD1 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC12.71□□□□□ -0.37
SHANK2-AS3Q9BTD1 TPM1-226ENST00000560959 925 ntTSL 2 BASIC12.71□□□□□ -0.37
SHANK2-AS3Q9BTD1 PNMT-203ENST00000581428 677 ntTSL 2 BASIC12.71□□□□□ -0.37
SHANK2-AS3Q9BTD1 CYGB-205ENST00000590175 830 ntTSL 3 BASIC12.71□□□□□ -0.37
SHANK2-AS3Q9BTD1 LINC01711-201ENST00000598340 967 ntBASIC12.71□□□□□ -0.37
SHANK2-AS3Q9BTD1 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC12.71□□□□□ -0.37
SHANK2-AS3Q9BTD1 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SHANK2-AS3Q9BTD1 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC12.71□□□□□ -0.37
SHANK2-AS3Q9BTD1 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC12.71□□□□□ -0.37
SHANK2-AS3Q9BTD1 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC12.71□□□□□ -0.37
SHANK2-AS3Q9BTD1 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
SHANK2-AS3Q9BTD1 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.38
SHANK2-AS3Q9BTD1 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
SHANK2-AS3Q9BTD1 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
SHANK2-AS3Q9BTD1 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
SHANK2-AS3Q9BTD1 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC12.71□□□□□ -0.38
SHANK2-AS3Q9BTD1 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
SHANK2-AS3Q9BTD1 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
SHANK2-AS3Q9BTD1 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
SHANK2-AS3Q9BTD1 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
SHANK2-AS3Q9BTD1 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
SHANK2-AS3Q9BTD1 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
SHANK2-AS3Q9BTD1 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC12.7□□□□□ -0.38
SHANK2-AS3Q9BTD1 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SHANK2-AS3Q9BTD1 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
SHANK2-AS3Q9BTD1 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
SHANK2-AS3Q9BTD1 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SHANK2-AS3Q9BTD1 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
SHANK2-AS3Q9BTD1 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
SHANK2-AS3Q9BTD1 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
SHANK2-AS3Q9BTD1 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SHANK2-AS3Q9BTD1 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
SHANK2-AS3Q9BTD1 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC12.7□□□□□ -0.38
SHANK2-AS3Q9BTD1 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC12.7□□□□□ -0.38
SHANK2-AS3Q9BTD1 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
SHANK2-AS3Q9BTD1 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
SHANK2-AS3Q9BTD1 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
SHANK2-AS3Q9BTD1 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC12.7□□□□□ -0.38
SHANK2-AS3Q9BTD1 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
SHANK2-AS3Q9BTD1 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SHANK2-AS3Q9BTD1 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
SHANK2-AS3Q9BTD1 DPM2-202ENST00000373110 738 ntTSL 2 BASIC12.7□□□□□ -0.38
SHANK2-AS3Q9BTD1 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC12.7□□□□□ -0.38
SHANK2-AS3Q9BTD1 HCG4P8-203ENST00000443049 980 ntBASIC12.7□□□□□ -0.38
SHANK2-AS3Q9BTD1 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
SHANK2-AS3Q9BTD1 SAPCD2P3-201ENST00000455031 850 ntBASIC12.7□□□□□ -0.38
SHANK2-AS3Q9BTD1 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC12.7□□□□□ -0.38
SHANK2-AS3Q9BTD1 NMU-205ENST00000511469 756 ntTSL 3 BASIC12.7□□□□□ -0.38
SHANK2-AS3Q9BTD1 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC12.7□□□□□ -0.38
SHANK2-AS3Q9BTD1 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC12.7□□□□□ -0.38
SHANK2-AS3Q9BTD1 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC12.7□□□□□ -0.38
SHANK2-AS3Q9BTD1 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC12.7□□□□□ -0.38
SHANK2-AS3Q9BTD1 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
SHANK2-AS3Q9BTD1 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SHANK2-AS3Q9BTD1 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC12.7□□□□□ -0.38
SHANK2-AS3Q9BTD1 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC12.7□□□□□ -0.38
SHANK2-AS3Q9BTD1 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC12.7□□□□□ -0.38
SHANK2-AS3Q9BTD1 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC12.7□□□□□ -0.38
SHANK2-AS3Q9BTD1 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SHANK2-AS3Q9BTD1 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SHANK2-AS3Q9BTD1 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC12.7□□□□□ -0.38
SHANK2-AS3Q9BTD1 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
SHANK2-AS3Q9BTD1 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC12.7□□□□□ -0.38
SHANK2-AS3Q9BTD1 ACE-203ENST00000413513 2237 ntTSL 2 BASIC12.7□□□□□ -0.38
SHANK2-AS3Q9BTD1 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SHANK2-AS3Q9BTD1 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
SHANK2-AS3Q9BTD1 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
SHANK2-AS3Q9BTD1 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SHANK2-AS3Q9BTD1 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC12.7□□□□□ -0.38
SHANK2-AS3Q9BTD1 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC12.7□□□□□ -0.38
SHANK2-AS3Q9BTD1 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
SHANK2-AS3Q9BTD1 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SHANK2-AS3Q9BTD1 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
SHANK2-AS3Q9BTD1 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
SHANK2-AS3Q9BTD1 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SHANK2-AS3Q9BTD1 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
SHANK2-AS3Q9BTD1 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC12.69□□□□□ -0.38
SHANK2-AS3Q9BTD1 AC112504.1-201ENST00000623415 1841 ntBASIC12.69□□□□□ -0.38
SHANK2-AS3Q9BTD1 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC12.69□□□□□ -0.38
SHANK2-AS3Q9BTD1 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SHANK2-AS3Q9BTD1 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SHANK2-AS3Q9BTD1 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
SHANK2-AS3Q9BTD1 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC12.69□□□□□ -0.38
SHANK2-AS3Q9BTD1 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
SHANK2-AS3Q9BTD1 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
SHANK2-AS3Q9BTD1 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
SHANK2-AS3Q9BTD1 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC12.69□□□□□ -0.38
SHANK2-AS3Q9BTD1 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SHANK2-AS3Q9BTD1 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
SHANK2-AS3Q9BTD1 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC12.69□□□□□ -0.38
SHANK2-AS3Q9BTD1 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
SHANK2-AS3Q9BTD1 AC069224.1-201ENST00000566372 1715 ntBASIC12.69□□□□□ -0.38
SHANK2-AS3Q9BTD1 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC12.69□□□□□ -0.38
SHANK2-AS3Q9BTD1 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
SHANK2-AS3Q9BTD1 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms