Protein–RNA interactions for Protein: Q9BQE3

TUBA1C, Tubulin alpha-1C chain, humanhuman

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1CQ9BQE3 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
TUBA1CQ9BQE3 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC15.62■□□□□ 0.09
TUBA1CQ9BQE3 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC15.62■□□□□ 0.09
TUBA1CQ9BQE3 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
TUBA1CQ9BQE3 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
TUBA1CQ9BQE3 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC15.62■□□□□ 0.09
TUBA1CQ9BQE3 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC15.62■□□□□ 0.09
TUBA1CQ9BQE3 TNRC18P2-201ENST00000417666 2714 ntBASIC15.62■□□□□ 0.09
TUBA1CQ9BQE3 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TUBA1CQ9BQE3 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TUBA1CQ9BQE3 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC15.62■□□□□ 0.09
TUBA1CQ9BQE3 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TUBA1CQ9BQE3 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
TUBA1CQ9BQE3 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC15.62■□□□□ 0.09
TUBA1CQ9BQE3 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC15.62■□□□□ 0.09
TUBA1CQ9BQE3 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TUBA1CQ9BQE3 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC15.62■□□□□ 0.09
TUBA1CQ9BQE3 KRT18P27-201ENST00000427733 1299 ntBASIC15.62■□□□□ 0.09
TUBA1CQ9BQE3 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC15.62■□□□□ 0.09
TUBA1CQ9BQE3 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC15.62■□□□□ 0.09
TUBA1CQ9BQE3 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
TUBA1CQ9BQE3 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC15.62■□□□□ 0.09
TUBA1CQ9BQE3 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC15.62■□□□□ 0.09
TUBA1CQ9BQE3 KRT18P58-201ENST00000527480 1120 ntBASIC15.62■□□□□ 0.09
TUBA1CQ9BQE3 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC15.62■□□□□ 0.09
TUBA1CQ9BQE3 AC145285.3-201ENST00000564603 959 ntBASIC15.62■□□□□ 0.09
TUBA1CQ9BQE3 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC15.62■□□□□ 0.09
TUBA1CQ9BQE3 PIN1-206ENST00000587625 878 ntTSL 2 BASIC15.62■□□□□ 0.09
TUBA1CQ9BQE3 TK1-204ENST00000590430 683 ntTSL 3 BASIC15.62■□□□□ 0.09
TUBA1CQ9BQE3 MIR1199-201ENST00000621445 119 ntBASIC15.62■□□□□ 0.09
TUBA1CQ9BQE3 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TUBA1CQ9BQE3 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TUBA1CQ9BQE3 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TUBA1CQ9BQE3 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC15.62■□□□□ 0.09
TUBA1CQ9BQE3 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
TUBA1CQ9BQE3 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC15.62■□□□□ 0.09
TUBA1CQ9BQE3 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
TUBA1CQ9BQE3 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TUBA1CQ9BQE3 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TUBA1CQ9BQE3 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC15.62■□□□□ 0.09
TUBA1CQ9BQE3 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TUBA1CQ9BQE3 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TUBA1CQ9BQE3 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TUBA1CQ9BQE3 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC15.62■□□□□ 0.09
TUBA1CQ9BQE3 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TUBA1CQ9BQE3 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TUBA1CQ9BQE3 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
TUBA1CQ9BQE3 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC15.61■□□□□ 0.09
TUBA1CQ9BQE3 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TUBA1CQ9BQE3 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TUBA1CQ9BQE3 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC15.61■□□□□ 0.09
TUBA1CQ9BQE3 NCF1C-201ENST00000438382 1427 ntBASIC15.61■□□□□ 0.09
TUBA1CQ9BQE3 AL391256.1-201ENST00000443260 1855 ntBASIC15.61■□□□□ 0.09
TUBA1CQ9BQE3 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TUBA1CQ9BQE3 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TUBA1CQ9BQE3 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC15.61■□□□□ 0.09
TUBA1CQ9BQE3 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC15.61■□□□□ 0.09
TUBA1CQ9BQE3 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC15.61■□□□□ 0.09
TUBA1CQ9BQE3 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TUBA1CQ9BQE3 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TUBA1CQ9BQE3 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
TUBA1CQ9BQE3 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TUBA1CQ9BQE3 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC15.61■□□□□ 0.09
TUBA1CQ9BQE3 AC073621.1-201ENST00000392730 636 ntBASIC15.61■□□□□ 0.09
TUBA1CQ9BQE3 MIR940-201ENST00000401276 94 ntBASIC15.61■□□□□ 0.09
TUBA1CQ9BQE3 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC15.61■□□□□ 0.09
TUBA1CQ9BQE3 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC15.61■□□□□ 0.09
TUBA1CQ9BQE3 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
TUBA1CQ9BQE3 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC15.61■□□□□ 0.09
TUBA1CQ9BQE3 AC004706.3-202ENST00000621574 984 ntBASIC15.61■□□□□ 0.09
TUBA1CQ9BQE3 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
TUBA1CQ9BQE3 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
TUBA1CQ9BQE3 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC15.61■□□□□ 0.09
TUBA1CQ9BQE3 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TUBA1CQ9BQE3 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
TUBA1CQ9BQE3 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TUBA1CQ9BQE3 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC15.61■□□□□ 0.09
TUBA1CQ9BQE3 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
TUBA1CQ9BQE3 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
TUBA1CQ9BQE3 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TUBA1CQ9BQE3 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC15.61■□□□□ 0.09
TUBA1CQ9BQE3 GID4-202ENST00000376345 1391 ntTSL 3 BASIC15.61■□□□□ 0.09
TUBA1CQ9BQE3 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC15.61■□□□□ 0.09
TUBA1CQ9BQE3 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TUBA1CQ9BQE3 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TUBA1CQ9BQE3 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TUBA1CQ9BQE3 AL603832.2-201ENST00000566195 2125 ntBASIC15.61■□□□□ 0.09
TUBA1CQ9BQE3 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC15.61■□□□□ 0.09
TUBA1CQ9BQE3 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TUBA1CQ9BQE3 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TUBA1CQ9BQE3 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TUBA1CQ9BQE3 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TUBA1CQ9BQE3 NFIC-211ENST00000641145 8399 ntBASIC15.6■□□□□ 0.09
TUBA1CQ9BQE3 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TUBA1CQ9BQE3 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
TUBA1CQ9BQE3 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TUBA1CQ9BQE3 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TUBA1CQ9BQE3 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC15.6■□□□□ 0.09
TUBA1CQ9BQE3 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TUBA1CQ9BQE3 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms