Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
NR1H4Q96RI1 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
NR1H4Q96RI1 UCKL1-AS1-201ENST00000623569 3602 ntBASIC15.57■□□□□ 0.08
NR1H4Q96RI1 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC15.57■□□□□ 0.08
NR1H4Q96RI1 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
NR1H4Q96RI1 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
NR1H4Q96RI1 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
NR1H4Q96RI1 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
NR1H4Q96RI1 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
NR1H4Q96RI1 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
NR1H4Q96RI1 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NR1H4Q96RI1 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NR1H4Q96RI1 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
NR1H4Q96RI1 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NR1H4Q96RI1 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
NR1H4Q96RI1 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
NR1H4Q96RI1 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC15.56■□□□□ 0.08
NR1H4Q96RI1 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
NR1H4Q96RI1 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NR1H4Q96RI1 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC15.56■□□□□ 0.08
NR1H4Q96RI1 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
NR1H4Q96RI1 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC15.56■□□□□ 0.08
NR1H4Q96RI1 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
NR1H4Q96RI1 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
NR1H4Q96RI1 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
NR1H4Q96RI1 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NR1H4Q96RI1 AC096633.1-201ENST00000422446 749 ntBASIC15.56■□□□□ 0.08
NR1H4Q96RI1 GRAMD4P1-201ENST00000435181 1110 ntBASIC15.56■□□□□ 0.08
NR1H4Q96RI1 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC15.56■□□□□ 0.08
NR1H4Q96RI1 AP003041.3-201ENST00000527151 707 ntBASIC15.56■□□□□ 0.08
NR1H4Q96RI1 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC15.56■□□□□ 0.08
NR1H4Q96RI1 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NR1H4Q96RI1 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC15.56■□□□□ 0.08
NR1H4Q96RI1 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC15.56■□□□□ 0.08
NR1H4Q96RI1 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
NR1H4Q96RI1 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NR1H4Q96RI1 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
NR1H4Q96RI1 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
NR1H4Q96RI1 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NR1H4Q96RI1 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC15.56■□□□□ 0.08
NR1H4Q96RI1 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NR1H4Q96RI1 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
NR1H4Q96RI1 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC15.56■□□□□ 0.08
NR1H4Q96RI1 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NR1H4Q96RI1 AL671710.1-201ENST00000610245 2349 ntBASIC15.56■□□□□ 0.08
NR1H4Q96RI1 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NR1H4Q96RI1 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC15.56■□□□□ 0.08
NR1H4Q96RI1 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC15.56■□□□□ 0.08
NR1H4Q96RI1 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
NR1H4Q96RI1 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
NR1H4Q96RI1 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NR1H4Q96RI1 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
NR1H4Q96RI1 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
NR1H4Q96RI1 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
NR1H4Q96RI1 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC15.55■□□□□ 0.08
NR1H4Q96RI1 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
NR1H4Q96RI1 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NR1H4Q96RI1 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC15.55■□□□□ 0.08
NR1H4Q96RI1 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
NR1H4Q96RI1 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
NR1H4Q96RI1 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NR1H4Q96RI1 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
NR1H4Q96RI1 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC15.55■□□□□ 0.08
NR1H4Q96RI1 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NR1H4Q96RI1 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
NR1H4Q96RI1 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
NR1H4Q96RI1 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NR1H4Q96RI1 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NR1H4Q96RI1 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC15.55■□□□□ 0.08
NR1H4Q96RI1 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC15.55■□□□□ 0.08
NR1H4Q96RI1 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
NR1H4Q96RI1 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC15.55■□□□□ 0.08
NR1H4Q96RI1 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
NR1H4Q96RI1 AL390955.1-201ENST00000428694 934 ntBASIC15.55■□□□□ 0.08
NR1H4Q96RI1 RBM17P1-201ENST00000453646 1190 ntBASIC15.55■□□□□ 0.08
NR1H4Q96RI1 CNP-204ENST00000472031 1019 ntTSL 2 BASIC15.55■□□□□ 0.08
NR1H4Q96RI1 AC008550.1-201ENST00000511500 884 ntBASIC15.55■□□□□ 0.08
NR1H4Q96RI1 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NR1H4Q96RI1 AP000525.1-201ENST00000608286 694 ntBASIC15.55■□□□□ 0.08
NR1H4Q96RI1 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
NR1H4Q96RI1 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NR1H4Q96RI1 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NR1H4Q96RI1 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC15.55■□□□□ 0.08
NR1H4Q96RI1 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
NR1H4Q96RI1 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
NR1H4Q96RI1 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
NR1H4Q96RI1 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
NR1H4Q96RI1 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
NR1H4Q96RI1 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
NR1H4Q96RI1 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
NR1H4Q96RI1 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC15.55■□□□□ 0.08
NR1H4Q96RI1 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NR1H4Q96RI1 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NR1H4Q96RI1 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NR1H4Q96RI1 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
NR1H4Q96RI1 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NR1H4Q96RI1 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC15.54■□□□□ 0.08
NR1H4Q96RI1 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC15.54■□□□□ 0.08
NR1H4Q96RI1 RER1-203ENST00000378513 3000 ntTSL 3 BASIC15.54■□□□□ 0.08
NR1H4Q96RI1 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms