Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NEK1Q96PY6 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NEK1Q96PY6 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
NEK1Q96PY6 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
NEK1Q96PY6 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
NEK1Q96PY6 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC19.48■□□□□ 0.71
NEK1Q96PY6 U82695.1-201ENST00000635752 1889 ntBASIC19.48■□□□□ 0.71
NEK1Q96PY6 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC19.48■□□□□ 0.71
NEK1Q96PY6 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NEK1Q96PY6 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NEK1Q96PY6 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
NEK1Q96PY6 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NEK1Q96PY6 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NEK1Q96PY6 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
NEK1Q96PY6 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
NEK1Q96PY6 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC19.47■□□□□ 0.71
NEK1Q96PY6 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NEK1Q96PY6 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
NEK1Q96PY6 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
NEK1Q96PY6 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
NEK1Q96PY6 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC19.47■□□□□ 0.71
NEK1Q96PY6 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
NEK1Q96PY6 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC19.47■□□□□ 0.71
NEK1Q96PY6 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
NEK1Q96PY6 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC19.47■□□□□ 0.71
NEK1Q96PY6 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
NEK1Q96PY6 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
NEK1Q96PY6 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC19.47■□□□□ 0.71
NEK1Q96PY6 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NEK1Q96PY6 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NEK1Q96PY6 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
NEK1Q96PY6 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NEK1Q96PY6 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
NEK1Q96PY6 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC19.46■□□□□ 0.71
NEK1Q96PY6 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC19.46■□□□□ 0.71
NEK1Q96PY6 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
NEK1Q96PY6 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NEK1Q96PY6 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
NEK1Q96PY6 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NEK1Q96PY6 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
NEK1Q96PY6 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
NEK1Q96PY6 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NEK1Q96PY6 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC19.46■□□□□ 0.71
NEK1Q96PY6 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC19.46■□□□□ 0.71
NEK1Q96PY6 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC19.46■□□□□ 0.71
NEK1Q96PY6 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
NEK1Q96PY6 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
NEK1Q96PY6 AC073439.1-201ENST00000624121 1774 ntBASIC19.46■□□□□ 0.71
NEK1Q96PY6 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
NEK1Q96PY6 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
NEK1Q96PY6 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC19.46■□□□□ 0.71
NEK1Q96PY6 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
NEK1Q96PY6 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC19.46■□□□□ 0.71
NEK1Q96PY6 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC19.46■□□□□ 0.71
NEK1Q96PY6 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
NEK1Q96PY6 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC19.46■□□□□ 0.71
NEK1Q96PY6 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
NEK1Q96PY6 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NEK1Q96PY6 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NEK1Q96PY6 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC19.45■□□□□ 0.7
NEK1Q96PY6 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
NEK1Q96PY6 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NEK1Q96PY6 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC19.45■□□□□ 0.7
NEK1Q96PY6 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
NEK1Q96PY6 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
NEK1Q96PY6 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NEK1Q96PY6 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
NEK1Q96PY6 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
NEK1Q96PY6 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
NEK1Q96PY6 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
NEK1Q96PY6 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
NEK1Q96PY6 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC19.45■□□□□ 0.7
NEK1Q96PY6 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC19.45■□□□□ 0.7
NEK1Q96PY6 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC19.45■□□□□ 0.7
NEK1Q96PY6 AC092865.5-201ENST00000545435 363 ntBASIC19.45■□□□□ 0.7
NEK1Q96PY6 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
NEK1Q96PY6 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
NEK1Q96PY6 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC19.45■□□□□ 0.7
NEK1Q96PY6 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NEK1Q96PY6 AC091812.2-201ENST00000619081 385 ntBASIC19.45■□□□□ 0.7
NEK1Q96PY6 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
NEK1Q96PY6 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NEK1Q96PY6 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
NEK1Q96PY6 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC19.45■□□□□ 0.7
NEK1Q96PY6 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
NEK1Q96PY6 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC19.45■□□□□ 0.7
NEK1Q96PY6 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NEK1Q96PY6 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
NEK1Q96PY6 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC19.45■□□□□ 0.7
NEK1Q96PY6 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC19.45■□□□□ 0.7
NEK1Q96PY6 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
NEK1Q96PY6 PGR-209ENST00000617858 2816 ntTSL 5 BASIC19.45■□□□□ 0.7
NEK1Q96PY6 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC19.45■□□□□ 0.7
NEK1Q96PY6 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC19.45■□□□□ 0.7
NEK1Q96PY6 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
NEK1Q96PY6 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC19.45■□□□□ 0.7
NEK1Q96PY6 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NEK1Q96PY6 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC19.44■□□□□ 0.7
NEK1Q96PY6 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NEK1Q96PY6 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms