Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
C9orf72Q96LT7 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
C9orf72Q96LT7 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC17.02■□□□□ 0.32
C9orf72Q96LT7 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC17.02■□□□□ 0.32
C9orf72Q96LT7 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
C9orf72Q96LT7 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC17.02■□□□□ 0.32
C9orf72Q96LT7 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
C9orf72Q96LT7 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
C9orf72Q96LT7 RAB17-203ENST00000409576 466 ntTSL 3 BASIC17.02■□□□□ 0.32
C9orf72Q96LT7 RPS2P1-201ENST00000434010 821 ntBASIC17.02■□□□□ 0.32
C9orf72Q96LT7 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
C9orf72Q96LT7 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
C9orf72Q96LT7 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC17.02■□□□□ 0.32
C9orf72Q96LT7 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC17.02■□□□□ 0.32
C9orf72Q96LT7 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC17.02■□□□□ 0.32
C9orf72Q96LT7 PNMT-203ENST00000581428 677 ntTSL 2 BASIC17.02■□□□□ 0.32
C9orf72Q96LT7 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC17.02■□□□□ 0.32
C9orf72Q96LT7 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.32
C9orf72Q96LT7 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
C9orf72Q96LT7 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
C9orf72Q96LT7 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
C9orf72Q96LT7 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
C9orf72Q96LT7 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
C9orf72Q96LT7 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
C9orf72Q96LT7 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
C9orf72Q96LT7 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
C9orf72Q96LT7 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
C9orf72Q96LT7 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC17.02■□□□□ 0.31
C9orf72Q96LT7 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
C9orf72Q96LT7 TOP3BP1-201ENST00000420768 1380 ntBASIC17.02■□□□□ 0.31
C9orf72Q96LT7 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC17.02■□□□□ 0.31
C9orf72Q96LT7 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
C9orf72Q96LT7 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC17.01■□□□□ 0.31
C9orf72Q96LT7 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
C9orf72Q96LT7 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
C9orf72Q96LT7 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
C9orf72Q96LT7 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
C9orf72Q96LT7 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
C9orf72Q96LT7 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
C9orf72Q96LT7 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
C9orf72Q96LT7 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
C9orf72Q96LT7 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
C9orf72Q96LT7 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC17.01■□□□□ 0.31
C9orf72Q96LT7 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
C9orf72Q96LT7 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC17.01■□□□□ 0.31
C9orf72Q96LT7 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
C9orf72Q96LT7 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC17.01■□□□□ 0.31
C9orf72Q96LT7 SLC25A1P1-201ENST00000528351 927 ntBASIC17.01■□□□□ 0.31
C9orf72Q96LT7 OR7E14P-202ENST00000530490 1290 ntBASIC17.01■□□□□ 0.31
C9orf72Q96LT7 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC17.01■□□□□ 0.31
C9orf72Q96LT7 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC17.01■□□□□ 0.31
C9orf72Q96LT7 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC17.01■□□□□ 0.31
C9orf72Q96LT7 AC025062.2-201ENST00000605477 670 ntBASIC17.01■□□□□ 0.31
C9orf72Q96LT7 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC17.01■□□□□ 0.31
C9orf72Q96LT7 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
C9orf72Q96LT7 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
C9orf72Q96LT7 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
C9orf72Q96LT7 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
C9orf72Q96LT7 AC068418.2-201ENST00000577309 3703 ntBASIC17.01■□□□□ 0.31
C9orf72Q96LT7 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
C9orf72Q96LT7 AC092384.3-202ENST00000564646 2873 ntBASIC17.01■□□□□ 0.31
C9orf72Q96LT7 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
C9orf72Q96LT7 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
C9orf72Q96LT7 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
C9orf72Q96LT7 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
C9orf72Q96LT7 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC17.01■□□□□ 0.31
C9orf72Q96LT7 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC17■□□□□ 0.31
C9orf72Q96LT7 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC17■□□□□ 0.31
C9orf72Q96LT7 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
C9orf72Q96LT7 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
C9orf72Q96LT7 PC-214ENST00000628663 1470 ntTSL 5 BASIC17■□□□□ 0.31
C9orf72Q96LT7 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
C9orf72Q96LT7 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
C9orf72Q96LT7 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC17■□□□□ 0.31
C9orf72Q96LT7 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
C9orf72Q96LT7 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
C9orf72Q96LT7 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC17■□□□□ 0.31
C9orf72Q96LT7 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC17■□□□□ 0.31
C9orf72Q96LT7 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
C9orf72Q96LT7 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC17■□□□□ 0.31
C9orf72Q96LT7 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
C9orf72Q96LT7 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC17■□□□□ 0.31
C9orf72Q96LT7 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC17■□□□□ 0.31
C9orf72Q96LT7 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC17■□□□□ 0.31
C9orf72Q96LT7 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
C9orf72Q96LT7 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC17■□□□□ 0.31
C9orf72Q96LT7 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC17■□□□□ 0.31
C9orf72Q96LT7 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
C9orf72Q96LT7 CALM1-205ENST00000553542 877 ntTSL 5 BASIC17■□□□□ 0.31
C9orf72Q96LT7 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC17■□□□□ 0.31
C9orf72Q96LT7 MTDHP4-201ENST00000600287 670 ntBASIC17■□□□□ 0.31
C9orf72Q96LT7 AC116407.3-201ENST00000623905 1129 ntBASIC17■□□□□ 0.31
C9orf72Q96LT7 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
C9orf72Q96LT7 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
C9orf72Q96LT7 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
C9orf72Q96LT7 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC17■□□□□ 0.31
C9orf72Q96LT7 OVCH1-AS1-204ENST00000641955 5529 ntBASIC17■□□□□ 0.31
C9orf72Q96LT7 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
C9orf72Q96LT7 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
C9orf72Q96LT7 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms