Protein–RNA interactions for Protein: Q96D59

RNF183, Probable E3 ubiquitin-protein ligase RNF183, humanhuman

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF183Q96D59 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC12.28□□□□□ -0.44
RNF183Q96D59 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
RNF183Q96D59 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC12.28□□□□□ -0.44
RNF183Q96D59 AC091167.2-201ENST00000579581 588 ntBASIC12.28□□□□□ -0.44
RNF183Q96D59 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC12.28□□□□□ -0.44
RNF183Q96D59 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
RNF183Q96D59 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
RNF183Q96D59 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
RNF183Q96D59 AC092919.2-201ENST00000623631 1645 ntBASIC12.28□□□□□ -0.44
RNF183Q96D59 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC12.28□□□□□ -0.44
RNF183Q96D59 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC12.28□□□□□ -0.44
RNF183Q96D59 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
RNF183Q96D59 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
RNF183Q96D59 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC12.28□□□□□ -0.44
RNF183Q96D59 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC12.28□□□□□ -0.44
RNF183Q96D59 TOP3BP1-201ENST00000420768 1380 ntBASIC12.28□□□□□ -0.44
RNF183Q96D59 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RNF183Q96D59 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
RNF183Q96D59 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
RNF183Q96D59 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RNF183Q96D59 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
RNF183Q96D59 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
RNF183Q96D59 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
RNF183Q96D59 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
RNF183Q96D59 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.44
RNF183Q96D59 FOS-208ENST00000555686 1496 ntTSL 2 BASIC12.27□□□□□ -0.44
RNF183Q96D59 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.44
RNF183Q96D59 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
RNF183Q96D59 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC12.27□□□□□ -0.44
RNF183Q96D59 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC12.27□□□□□ -0.44
RNF183Q96D59 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
RNF183Q96D59 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.44
RNF183Q96D59 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
RNF183Q96D59 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
RNF183Q96D59 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
RNF183Q96D59 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
RNF183Q96D59 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
RNF183Q96D59 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.44
RNF183Q96D59 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
RNF183Q96D59 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC12.27□□□□□ -0.44
RNF183Q96D59 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC12.27□□□□□ -0.44
RNF183Q96D59 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
RNF183Q96D59 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
RNF183Q96D59 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC12.27□□□□□ -0.45
RNF183Q96D59 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC12.27□□□□□ -0.45
RNF183Q96D59 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
RNF183Q96D59 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
RNF183Q96D59 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
RNF183Q96D59 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC12.27□□□□□ -0.45
RNF183Q96D59 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC12.27□□□□□ -0.45
RNF183Q96D59 PMS2P2-201ENST00000425039 1128 ntBASIC12.27□□□□□ -0.45
RNF183Q96D59 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC12.27□□□□□ -0.45
RNF183Q96D59 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
RNF183Q96D59 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
RNF183Q96D59 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC12.27□□□□□ -0.45
RNF183Q96D59 FAM86C2P-203ENST00000528684 1004 ntBASIC12.27□□□□□ -0.45
RNF183Q96D59 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC12.27□□□□□ -0.45
RNF183Q96D59 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC12.27□□□□□ -0.45
RNF183Q96D59 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC12.27□□□□□ -0.45
RNF183Q96D59 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC12.27□□□□□ -0.45
RNF183Q96D59 AP001350.2-201ENST00000625104 1094 ntBASIC12.27□□□□□ -0.45
RNF183Q96D59 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
RNF183Q96D59 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
RNF183Q96D59 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
RNF183Q96D59 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
RNF183Q96D59 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC12.27□□□□□ -0.45
RNF183Q96D59 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
RNF183Q96D59 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
RNF183Q96D59 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
RNF183Q96D59 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
RNF183Q96D59 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
RNF183Q96D59 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC12.27□□□□□ -0.45
RNF183Q96D59 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
RNF183Q96D59 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC12.27□□□□□ -0.45
RNF183Q96D59 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
RNF183Q96D59 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
RNF183Q96D59 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
RNF183Q96D59 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
RNF183Q96D59 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
RNF183Q96D59 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC12.27□□□□□ -0.45
RNF183Q96D59 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
RNF183Q96D59 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
RNF183Q96D59 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
RNF183Q96D59 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
RNF183Q96D59 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC12.26□□□□□ -0.45
RNF183Q96D59 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC12.26□□□□□ -0.45
RNF183Q96D59 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
RNF183Q96D59 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
RNF183Q96D59 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
RNF183Q96D59 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
RNF183Q96D59 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
RNF183Q96D59 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
RNF183Q96D59 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
RNF183Q96D59 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
RNF183Q96D59 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC12.26□□□□□ -0.45
RNF183Q96D59 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
RNF183Q96D59 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
RNF183Q96D59 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC12.26□□□□□ -0.45
RNF183Q96D59 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
RNF183Q96D59 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms