Protein–RNA interactions for Protein: Q96CC6

RHBDF1, Inactive rhomboid protein 1, humanhuman

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1Q96CC6 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
RHBDF1Q96CC6 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
RHBDF1Q96CC6 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC16.04■□□□□ 0.16
RHBDF1Q96CC6 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.04■□□□□ 0.16
RHBDF1Q96CC6 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RHBDF1Q96CC6 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
RHBDF1Q96CC6 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RHBDF1Q96CC6 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
RHBDF1Q96CC6 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
RHBDF1Q96CC6 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
RHBDF1Q96CC6 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RHBDF1Q96CC6 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RHBDF1Q96CC6 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
RHBDF1Q96CC6 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RHBDF1Q96CC6 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
RHBDF1Q96CC6 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RHBDF1Q96CC6 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
RHBDF1Q96CC6 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RHBDF1Q96CC6 BEX3-201ENST00000361298 921 ntTSL 2 BASIC16.04■□□□□ 0.16
RHBDF1Q96CC6 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC16.04■□□□□ 0.16
RHBDF1Q96CC6 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
RHBDF1Q96CC6 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
RHBDF1Q96CC6 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC16.04■□□□□ 0.16
RHBDF1Q96CC6 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
RHBDF1Q96CC6 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC16.04■□□□□ 0.16
RHBDF1Q96CC6 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC16.04■□□□□ 0.16
RHBDF1Q96CC6 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC16.04■□□□□ 0.16
RHBDF1Q96CC6 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC16.04■□□□□ 0.16
RHBDF1Q96CC6 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC16.04■□□□□ 0.16
RHBDF1Q96CC6 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.04■□□□□ 0.16
RHBDF1Q96CC6 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RHBDF1Q96CC6 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.04■□□□□ 0.16
RHBDF1Q96CC6 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RHBDF1Q96CC6 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RHBDF1Q96CC6 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RHBDF1Q96CC6 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RHBDF1Q96CC6 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
RHBDF1Q96CC6 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
RHBDF1Q96CC6 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RHBDF1Q96CC6 AL592424.1-201ENST00000563624 1536 ntBASIC16.04■□□□□ 0.16
RHBDF1Q96CC6 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
RHBDF1Q96CC6 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RHBDF1Q96CC6 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC16.04■□□□□ 0.16
RHBDF1Q96CC6 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RHBDF1Q96CC6 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC16.03■□□□□ 0.16
RHBDF1Q96CC6 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RHBDF1Q96CC6 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
RHBDF1Q96CC6 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC16.03■□□□□ 0.16
RHBDF1Q96CC6 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RHBDF1Q96CC6 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RHBDF1Q96CC6 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
RHBDF1Q96CC6 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RHBDF1Q96CC6 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RHBDF1Q96CC6 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RHBDF1Q96CC6 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RHBDF1Q96CC6 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC16.03■□□□□ 0.16
RHBDF1Q96CC6 AC026396.1-201ENST00000419388 421 ntBASIC16.03■□□□□ 0.16
RHBDF1Q96CC6 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC16.03■□□□□ 0.16
RHBDF1Q96CC6 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC16.03■□□□□ 0.16
RHBDF1Q96CC6 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC16.03■□□□□ 0.16
RHBDF1Q96CC6 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC16.03■□□□□ 0.16
RHBDF1Q96CC6 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RHBDF1Q96CC6 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RHBDF1Q96CC6 HS6ST1P1-201ENST00000481504 1234 ntBASIC16.03■□□□□ 0.16
RHBDF1Q96CC6 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RHBDF1Q96CC6 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
RHBDF1Q96CC6 AC106730.1-201ENST00000566722 1090 ntBASIC16.03■□□□□ 0.16
RHBDF1Q96CC6 AC120114.3-201ENST00000611923 658 ntBASIC16.03■□□□□ 0.16
RHBDF1Q96CC6 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RHBDF1Q96CC6 AC092919.2-201ENST00000623631 1645 ntBASIC16.03■□□□□ 0.16
RHBDF1Q96CC6 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RHBDF1Q96CC6 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RHBDF1Q96CC6 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RHBDF1Q96CC6 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
RHBDF1Q96CC6 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.03■□□□□ 0.16
RHBDF1Q96CC6 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RHBDF1Q96CC6 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
RHBDF1Q96CC6 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.03■□□□□ 0.16
RHBDF1Q96CC6 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
RHBDF1Q96CC6 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC16.03■□□□□ 0.16
RHBDF1Q96CC6 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RHBDF1Q96CC6 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RHBDF1Q96CC6 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RHBDF1Q96CC6 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RHBDF1Q96CC6 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RHBDF1Q96CC6 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
RHBDF1Q96CC6 AC132872.4-202ENST00000622924 2756 ntBASIC16.03■□□□□ 0.16
RHBDF1Q96CC6 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC16.03■□□□□ 0.16
RHBDF1Q96CC6 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
RHBDF1Q96CC6 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RHBDF1Q96CC6 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RHBDF1Q96CC6 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RHBDF1Q96CC6 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RHBDF1Q96CC6 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
RHBDF1Q96CC6 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
RHBDF1Q96CC6 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC16.02■□□□□ 0.16
RHBDF1Q96CC6 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.02■□□□□ 0.16
RHBDF1Q96CC6 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
RHBDF1Q96CC6 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
RHBDF1Q96CC6 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC16.02■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms