Protein–RNA interactions for Protein: Q8TDG2

ACTRT1, Actin-related protein T1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTRT1Q8TDG2 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
ACTRT1Q8TDG2 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ACTRT1Q8TDG2 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC17.17■□□□□ 0.34
ACTRT1Q8TDG2 DPM2-202ENST00000373110 738 ntTSL 2 BASIC17.17■□□□□ 0.34
ACTRT1Q8TDG2 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ACTRT1Q8TDG2 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC17.17■□□□□ 0.34
ACTRT1Q8TDG2 ELK2BP-201ENST00000415014 1224 ntBASIC17.17■□□□□ 0.34
ACTRT1Q8TDG2 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC17.17■□□□□ 0.34
ACTRT1Q8TDG2 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC17.17■□□□□ 0.34
ACTRT1Q8TDG2 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC17.17■□□□□ 0.34
ACTRT1Q8TDG2 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC17.17■□□□□ 0.34
ACTRT1Q8TDG2 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
ACTRT1Q8TDG2 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC17.17■□□□□ 0.34
ACTRT1Q8TDG2 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC17.17■□□□□ 0.34
ACTRT1Q8TDG2 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC17.17■□□□□ 0.34
ACTRT1Q8TDG2 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ACTRT1Q8TDG2 AC023157.3-201ENST00000619086 2088 ntBASIC17.17■□□□□ 0.34
ACTRT1Q8TDG2 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC17.17■□□□□ 0.34
ACTRT1Q8TDG2 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC17.17■□□□□ 0.34
ACTRT1Q8TDG2 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ACTRT1Q8TDG2 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
ACTRT1Q8TDG2 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ACTRT1Q8TDG2 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ACTRT1Q8TDG2 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ACTRT1Q8TDG2 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ACTRT1Q8TDG2 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC17.16■□□□□ 0.34
ACTRT1Q8TDG2 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC17.16■□□□□ 0.34
ACTRT1Q8TDG2 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ACTRT1Q8TDG2 AC020658.6-201ENST00000623564 1870 ntBASIC17.16■□□□□ 0.34
ACTRT1Q8TDG2 U82695.1-201ENST00000635752 1889 ntBASIC17.16■□□□□ 0.34
ACTRT1Q8TDG2 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC17.16■□□□□ 0.34
ACTRT1Q8TDG2 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
ACTRT1Q8TDG2 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ACTRT1Q8TDG2 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
ACTRT1Q8TDG2 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ACTRT1Q8TDG2 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
ACTRT1Q8TDG2 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ACTRT1Q8TDG2 TNRC18P2-201ENST00000417666 2714 ntBASIC17.16■□□□□ 0.34
ACTRT1Q8TDG2 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
ACTRT1Q8TDG2 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ACTRT1Q8TDG2 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC17.16■□□□□ 0.34
ACTRT1Q8TDG2 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ACTRT1Q8TDG2 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ACTRT1Q8TDG2 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC17.16■□□□□ 0.34
ACTRT1Q8TDG2 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ACTRT1Q8TDG2 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC17.16■□□□□ 0.34
ACTRT1Q8TDG2 FGFR3P6-201ENST00000457012 610 ntBASIC17.16■□□□□ 0.34
ACTRT1Q8TDG2 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC17.16■□□□□ 0.34
ACTRT1Q8TDG2 MMP17-203ENST00000535004 719 ntTSL 3 BASIC17.16■□□□□ 0.34
ACTRT1Q8TDG2 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ACTRT1Q8TDG2 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC17.16■□□□□ 0.34
ACTRT1Q8TDG2 AC087388.1-201ENST00000571370 1112 ntBASIC17.16■□□□□ 0.34
ACTRT1Q8TDG2 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
ACTRT1Q8TDG2 AL732292.2-201ENST00000609649 430 ntBASIC17.16■□□□□ 0.34
ACTRT1Q8TDG2 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
ACTRT1Q8TDG2 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ACTRT1Q8TDG2 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
ACTRT1Q8TDG2 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
ACTRT1Q8TDG2 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC17.16■□□□□ 0.34
ACTRT1Q8TDG2 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
ACTRT1Q8TDG2 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
ACTRT1Q8TDG2 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC17.16■□□□□ 0.34
ACTRT1Q8TDG2 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ACTRT1Q8TDG2 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ACTRT1Q8TDG2 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
ACTRT1Q8TDG2 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC17.15■□□□□ 0.34
ACTRT1Q8TDG2 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC17.15■□□□□ 0.34
ACTRT1Q8TDG2 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ACTRT1Q8TDG2 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
ACTRT1Q8TDG2 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
ACTRT1Q8TDG2 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
ACTRT1Q8TDG2 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
ACTRT1Q8TDG2 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
ACTRT1Q8TDG2 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC17.15■□□□□ 0.34
ACTRT1Q8TDG2 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
ACTRT1Q8TDG2 LSM5-204ENST00000409909 740 ntTSL 2 BASIC17.15■□□□□ 0.34
ACTRT1Q8TDG2 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
ACTRT1Q8TDG2 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ACTRT1Q8TDG2 GGTLC5P-201ENST00000617623 998 ntBASIC17.15■□□□□ 0.34
ACTRT1Q8TDG2 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
ACTRT1Q8TDG2 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ACTRT1Q8TDG2 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
ACTRT1Q8TDG2 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
ACTRT1Q8TDG2 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC17.15■□□□□ 0.34
ACTRT1Q8TDG2 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
ACTRT1Q8TDG2 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC17.15■□□□□ 0.34
ACTRT1Q8TDG2 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC17.15■□□□□ 0.34
ACTRT1Q8TDG2 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ACTRT1Q8TDG2 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
ACTRT1Q8TDG2 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ACTRT1Q8TDG2 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ACTRT1Q8TDG2 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
ACTRT1Q8TDG2 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
ACTRT1Q8TDG2 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.34
ACTRT1Q8TDG2 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
ACTRT1Q8TDG2 CASK-202ENST00000378158 3848 ntTSL 5 BASIC17.14■□□□□ 0.33
ACTRT1Q8TDG2 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ACTRT1Q8TDG2 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ACTRT1Q8TDG2 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ACTRT1Q8TDG2 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms