Protein–RNA interactions for Protein: Q8TBE3

FNDC9, Fibronectin type III domain-containing protein 9, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC9Q8TBE3 UBALD1-205ENST00000590891 2641 ntBASIC14.85□□□□□ -0.03
FNDC9Q8TBE3 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
FNDC9Q8TBE3 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC14.85□□□□□ -0.03
FNDC9Q8TBE3 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
FNDC9Q8TBE3 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
FNDC9Q8TBE3 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
FNDC9Q8TBE3 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
FNDC9Q8TBE3 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
FNDC9Q8TBE3 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
FNDC9Q8TBE3 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
FNDC9Q8TBE3 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC14.85□□□□□ -0.03
FNDC9Q8TBE3 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
FNDC9Q8TBE3 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC14.84□□□□□ -0.03
FNDC9Q8TBE3 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
FNDC9Q8TBE3 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
FNDC9Q8TBE3 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
FNDC9Q8TBE3 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
FNDC9Q8TBE3 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
FNDC9Q8TBE3 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
FNDC9Q8TBE3 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
FNDC9Q8TBE3 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
FNDC9Q8TBE3 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
FNDC9Q8TBE3 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC14.84□□□□□ -0.03
FNDC9Q8TBE3 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC14.84□□□□□ -0.03
FNDC9Q8TBE3 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
FNDC9Q8TBE3 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC14.84□□□□□ -0.03
FNDC9Q8TBE3 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
FNDC9Q8TBE3 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
FNDC9Q8TBE3 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC14.84□□□□□ -0.03
FNDC9Q8TBE3 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
FNDC9Q8TBE3 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
FNDC9Q8TBE3 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
FNDC9Q8TBE3 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
FNDC9Q8TBE3 TSEN15P1-201ENST00000423257 515 ntBASIC14.84□□□□□ -0.03
FNDC9Q8TBE3 AC069335.1-201ENST00000489972 472 ntBASIC14.84□□□□□ -0.03
FNDC9Q8TBE3 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC14.84□□□□□ -0.03
FNDC9Q8TBE3 AC093520.2-201ENST00000561830 333 ntBASIC14.84□□□□□ -0.03
FNDC9Q8TBE3 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
FNDC9Q8TBE3 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC14.84□□□□□ -0.03
FNDC9Q8TBE3 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC14.84□□□□□ -0.03
FNDC9Q8TBE3 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
FNDC9Q8TBE3 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
FNDC9Q8TBE3 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
FNDC9Q8TBE3 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
FNDC9Q8TBE3 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
FNDC9Q8TBE3 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC14.84□□□□□ -0.03
FNDC9Q8TBE3 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC14.84□□□□□ -0.03
FNDC9Q8TBE3 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
FNDC9Q8TBE3 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
FNDC9Q8TBE3 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC14.84□□□□□ -0.03
FNDC9Q8TBE3 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
FNDC9Q8TBE3 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
FNDC9Q8TBE3 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
FNDC9Q8TBE3 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
FNDC9Q8TBE3 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC14.84□□□□□ -0.03
FNDC9Q8TBE3 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
FNDC9Q8TBE3 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
FNDC9Q8TBE3 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
FNDC9Q8TBE3 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
FNDC9Q8TBE3 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
FNDC9Q8TBE3 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
FNDC9Q8TBE3 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
FNDC9Q8TBE3 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
FNDC9Q8TBE3 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
FNDC9Q8TBE3 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC14.83□□□□□ -0.04
FNDC9Q8TBE3 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
FNDC9Q8TBE3 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
FNDC9Q8TBE3 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
FNDC9Q8TBE3 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
FNDC9Q8TBE3 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC14.83□□□□□ -0.04
FNDC9Q8TBE3 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
FNDC9Q8TBE3 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
FNDC9Q8TBE3 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC14.83□□□□□ -0.04
FNDC9Q8TBE3 KRT18P34-201ENST00000488218 1270 ntBASIC14.83□□□□□ -0.04
FNDC9Q8TBE3 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
FNDC9Q8TBE3 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
FNDC9Q8TBE3 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC14.83□□□□□ -0.04
FNDC9Q8TBE3 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
FNDC9Q8TBE3 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC14.83□□□□□ -0.04
FNDC9Q8TBE3 AL139011.1-202ENST00000642063 584 ntBASIC14.83□□□□□ -0.04
FNDC9Q8TBE3 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
FNDC9Q8TBE3 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
FNDC9Q8TBE3 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
FNDC9Q8TBE3 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC14.83□□□□□ -0.04
FNDC9Q8TBE3 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC14.83□□□□□ -0.04
FNDC9Q8TBE3 RNF216P1-203ENST00000404404 2427 ntBASIC14.83□□□□□ -0.04
FNDC9Q8TBE3 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC14.83□□□□□ -0.04
FNDC9Q8TBE3 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC14.83□□□□□ -0.04
FNDC9Q8TBE3 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC14.83□□□□□ -0.04
FNDC9Q8TBE3 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC14.83□□□□□ -0.04
FNDC9Q8TBE3 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
FNDC9Q8TBE3 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC14.82□□□□□ -0.04
FNDC9Q8TBE3 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
FNDC9Q8TBE3 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
FNDC9Q8TBE3 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
FNDC9Q8TBE3 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
FNDC9Q8TBE3 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
FNDC9Q8TBE3 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
FNDC9Q8TBE3 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
FNDC9Q8TBE3 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms