Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
COL27A1Q8IZC6 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
COL27A1Q8IZC6 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
COL27A1Q8IZC6 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
COL27A1Q8IZC6 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC15.2■□□□□ 0.02
COL27A1Q8IZC6 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
COL27A1Q8IZC6 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
COL27A1Q8IZC6 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
COL27A1Q8IZC6 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
COL27A1Q8IZC6 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
COL27A1Q8IZC6 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
COL27A1Q8IZC6 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
COL27A1Q8IZC6 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
COL27A1Q8IZC6 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
COL27A1Q8IZC6 STX1A-203ENST00000395155 783 ntTSL 2 BASIC15.2■□□□□ 0.02
COL27A1Q8IZC6 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
COL27A1Q8IZC6 MIR1247-201ENST00000408206 136 ntBASIC15.2■□□□□ 0.02
COL27A1Q8IZC6 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC15.2■□□□□ 0.02
COL27A1Q8IZC6 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC15.2■□□□□ 0.02
COL27A1Q8IZC6 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC15.2■□□□□ 0.02
COL27A1Q8IZC6 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC15.2■□□□□ 0.02
COL27A1Q8IZC6 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC15.2■□□□□ 0.02
COL27A1Q8IZC6 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC15.2■□□□□ 0.02
COL27A1Q8IZC6 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC15.2■□□□□ 0.02
COL27A1Q8IZC6 AL359711.2-201ENST00000563105 872 ntBASIC15.2■□□□□ 0.02
COL27A1Q8IZC6 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
COL27A1Q8IZC6 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC15.2■□□□□ 0.02
COL27A1Q8IZC6 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
COL27A1Q8IZC6 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC15.2■□□□□ 0.02
COL27A1Q8IZC6 AC009053.2-201ENST00000563701 2365 ntBASIC15.2■□□□□ 0.02
COL27A1Q8IZC6 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
COL27A1Q8IZC6 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
COL27A1Q8IZC6 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
COL27A1Q8IZC6 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
COL27A1Q8IZC6 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
COL27A1Q8IZC6 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
COL27A1Q8IZC6 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
COL27A1Q8IZC6 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
COL27A1Q8IZC6 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC15.19■□□□□ 0.02
COL27A1Q8IZC6 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
COL27A1Q8IZC6 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC15.19■□□□□ 0.02
COL27A1Q8IZC6 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
COL27A1Q8IZC6 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
COL27A1Q8IZC6 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
COL27A1Q8IZC6 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
COL27A1Q8IZC6 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
COL27A1Q8IZC6 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC15.19■□□□□ 0.02
COL27A1Q8IZC6 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC15.19■□□□□ 0.02
COL27A1Q8IZC6 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC15.19■□□□□ 0.02
COL27A1Q8IZC6 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC15.19■□□□□ 0.02
COL27A1Q8IZC6 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC15.19■□□□□ 0.02
COL27A1Q8IZC6 FXR1-221ENST00000491674 365 ntTSL 2 BASIC15.19■□□□□ 0.02
COL27A1Q8IZC6 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
COL27A1Q8IZC6 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC15.19■□□□□ 0.02
COL27A1Q8IZC6 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC15.19■□□□□ 0.02
COL27A1Q8IZC6 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
COL27A1Q8IZC6 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC15.19■□□□□ 0.02
COL27A1Q8IZC6 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC15.19■□□□□ 0.02
COL27A1Q8IZC6 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
COL27A1Q8IZC6 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC15.19■□□□□ 0.02
COL27A1Q8IZC6 RERG-209ENST00000546331 1383 ntTSL 2 BASIC15.19■□□□□ 0.02
COL27A1Q8IZC6 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
COL27A1Q8IZC6 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
COL27A1Q8IZC6 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
COL27A1Q8IZC6 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC15.19■□□□□ 0.02
COL27A1Q8IZC6 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
COL27A1Q8IZC6 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC15.19■□□□□ 0.02
COL27A1Q8IZC6 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
COL27A1Q8IZC6 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
COL27A1Q8IZC6 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
COL27A1Q8IZC6 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
COL27A1Q8IZC6 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
COL27A1Q8IZC6 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
COL27A1Q8IZC6 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
COL27A1Q8IZC6 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
COL27A1Q8IZC6 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
COL27A1Q8IZC6 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
COL27A1Q8IZC6 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
COL27A1Q8IZC6 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC15.18■□□□□ 0.02
COL27A1Q8IZC6 APOA1-205ENST00000375329 927 ntTSL 2 BASIC15.18■□□□□ 0.02
COL27A1Q8IZC6 AC004987.2-201ENST00000395959 1148 ntBASIC15.18■□□□□ 0.02
COL27A1Q8IZC6 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
COL27A1Q8IZC6 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
COL27A1Q8IZC6 RNA5SP412-201ENST00000516234 123 ntBASIC15.18■□□□□ 0.02
COL27A1Q8IZC6 SLC25A47P1-201ENST00000531577 414 ntBASIC15.18■□□□□ 0.02
COL27A1Q8IZC6 TDH-203ENST00000531764 1110 ntBASIC15.18■□□□□ 0.02
COL27A1Q8IZC6 AC009542.2-202ENST00000619004 1067 ntBASIC15.18■□□□□ 0.02
COL27A1Q8IZC6 AC005252.2-201ENST00000624630 1141 ntBASIC15.18■□□□□ 0.02
COL27A1Q8IZC6 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
COL27A1Q8IZC6 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
COL27A1Q8IZC6 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC15.18■□□□□ 0.02
COL27A1Q8IZC6 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
COL27A1Q8IZC6 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
COL27A1Q8IZC6 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
COL27A1Q8IZC6 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
COL27A1Q8IZC6 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC15.18■□□□□ 0.02
COL27A1Q8IZC6 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC15.18■□□□□ 0.02
COL27A1Q8IZC6 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
COL27A1Q8IZC6 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
COL27A1Q8IZC6 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms