Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM42Q8IWZ5 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
TRIM42Q8IWZ5 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC16.51■□□□□ 0.23
TRIM42Q8IWZ5 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM42Q8IWZ5 SPDYE21P-201ENST00000413323 827 ntBASIC16.51■□□□□ 0.23
TRIM42Q8IWZ5 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC16.51■□□□□ 0.23
TRIM42Q8IWZ5 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC16.51■□□□□ 0.23
TRIM42Q8IWZ5 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM42Q8IWZ5 KRT8P26-201ENST00000534154 1276 ntBASIC16.51■□□□□ 0.23
TRIM42Q8IWZ5 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC16.51■□□□□ 0.23
TRIM42Q8IWZ5 ABR-204ENST00000543210 1049 ntTSL 2 BASIC16.51■□□□□ 0.23
TRIM42Q8IWZ5 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC16.51■□□□□ 0.23
TRIM42Q8IWZ5 ABR-217ENST00000572441 563 ntTSL 4 BASIC16.51■□□□□ 0.23
TRIM42Q8IWZ5 METTL23-204ENST00000586752 904 ntTSL 2 BASIC16.51■□□□□ 0.23
TRIM42Q8IWZ5 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM42Q8IWZ5 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM42Q8IWZ5 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM42Q8IWZ5 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM42Q8IWZ5 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM42Q8IWZ5 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM42Q8IWZ5 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM42Q8IWZ5 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM42Q8IWZ5 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM42Q8IWZ5 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM42Q8IWZ5 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC16.51■□□□□ 0.23
TRIM42Q8IWZ5 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM42Q8IWZ5 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM42Q8IWZ5 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM42Q8IWZ5 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM42Q8IWZ5 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
TRIM42Q8IWZ5 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM42Q8IWZ5 AC016734.2-201ENST00000624325 1377 ntBASIC16.51■□□□□ 0.23
TRIM42Q8IWZ5 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM42Q8IWZ5 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC16.5■□□□□ 0.23
TRIM42Q8IWZ5 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM42Q8IWZ5 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC16.5■□□□□ 0.23
TRIM42Q8IWZ5 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM42Q8IWZ5 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM42Q8IWZ5 ACE-203ENST00000413513 2237 ntTSL 2 BASIC16.5■□□□□ 0.23
TRIM42Q8IWZ5 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
TRIM42Q8IWZ5 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
TRIM42Q8IWZ5 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
TRIM42Q8IWZ5 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC16.5■□□□□ 0.23
TRIM42Q8IWZ5 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM42Q8IWZ5 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
TRIM42Q8IWZ5 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM42Q8IWZ5 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM42Q8IWZ5 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM42Q8IWZ5 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM42Q8IWZ5 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM42Q8IWZ5 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC16.5■□□□□ 0.23
TRIM42Q8IWZ5 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC16.5■□□□□ 0.23
TRIM42Q8IWZ5 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC16.5■□□□□ 0.23
TRIM42Q8IWZ5 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC16.5■□□□□ 0.23
TRIM42Q8IWZ5 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC16.5■□□□□ 0.23
TRIM42Q8IWZ5 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC16.5■□□□□ 0.23
TRIM42Q8IWZ5 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM42Q8IWZ5 BCL10-202ENST00000620248 774 ntTSL 5 BASIC16.5■□□□□ 0.23
TRIM42Q8IWZ5 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
TRIM42Q8IWZ5 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM42Q8IWZ5 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC16.5■□□□□ 0.23
TRIM42Q8IWZ5 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM42Q8IWZ5 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM42Q8IWZ5 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC16.5■□□□□ 0.23
TRIM42Q8IWZ5 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC16.5■□□□□ 0.23
TRIM42Q8IWZ5 CDC14C-201ENST00000428251 1719 ntBASIC16.5■□□□□ 0.23
TRIM42Q8IWZ5 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM42Q8IWZ5 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM42Q8IWZ5 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM42Q8IWZ5 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC16.5■□□□□ 0.23
TRIM42Q8IWZ5 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM42Q8IWZ5 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
TRIM42Q8IWZ5 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM42Q8IWZ5 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM42Q8IWZ5 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC16.5■□□□□ 0.23
TRIM42Q8IWZ5 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
TRIM42Q8IWZ5 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM42Q8IWZ5 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM42Q8IWZ5 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC16.5■□□□□ 0.23
TRIM42Q8IWZ5 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC16.5■□□□□ 0.23
TRIM42Q8IWZ5 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM42Q8IWZ5 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
TRIM42Q8IWZ5 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM42Q8IWZ5 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
TRIM42Q8IWZ5 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC16.49■□□□□ 0.23
TRIM42Q8IWZ5 LINC02447-202ENST00000501888 2146 ntBASIC16.49■□□□□ 0.23
TRIM42Q8IWZ5 AC004817.3-201ENST00000602957 2129 ntBASIC16.49■□□□□ 0.23
TRIM42Q8IWZ5 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM42Q8IWZ5 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM42Q8IWZ5 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM42Q8IWZ5 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM42Q8IWZ5 INTS4P1-201ENST00000438455 1935 ntBASIC16.49■□□□□ 0.23
TRIM42Q8IWZ5 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM42Q8IWZ5 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM42Q8IWZ5 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM42Q8IWZ5 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
TRIM42Q8IWZ5 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM42Q8IWZ5 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM42Q8IWZ5 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
TRIM42Q8IWZ5 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms