Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LINC00346Q8IVM7 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LINC00346Q8IVM7 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC14.62□□□□□ -0.07
LINC00346Q8IVM7 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LINC00346Q8IVM7 AC006449.6-201ENST00000612330 2296 ntBASIC14.62□□□□□ -0.07
LINC00346Q8IVM7 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LINC00346Q8IVM7 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LINC00346Q8IVM7 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
LINC00346Q8IVM7 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC14.62□□□□□ -0.07
LINC00346Q8IVM7 CSF3-203ENST00000394148 622 ntTSL 3 BASIC14.62□□□□□ -0.07
LINC00346Q8IVM7 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC14.62□□□□□ -0.07
LINC00346Q8IVM7 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
LINC00346Q8IVM7 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LINC00346Q8IVM7 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC14.62□□□□□ -0.07
LINC00346Q8IVM7 PP7080-204ENST00000510714 601 ntTSL 3 BASIC14.62□□□□□ -0.07
LINC00346Q8IVM7 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LINC00346Q8IVM7 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC14.62□□□□□ -0.07
LINC00346Q8IVM7 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC14.62□□□□□ -0.07
LINC00346Q8IVM7 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC14.62□□□□□ -0.07
LINC00346Q8IVM7 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC14.62□□□□□ -0.07
LINC00346Q8IVM7 AL160237.2-201ENST00000556165 472 ntBASIC14.62□□□□□ -0.07
LINC00346Q8IVM7 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC14.62□□□□□ -0.07
LINC00346Q8IVM7 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC14.62□□□□□ -0.07
LINC00346Q8IVM7 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC14.62□□□□□ -0.07
LINC00346Q8IVM7 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC14.62□□□□□ -0.07
LINC00346Q8IVM7 PGR-209ENST00000617858 2816 ntTSL 5 BASIC14.62□□□□□ -0.07
LINC00346Q8IVM7 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC14.62□□□□□ -0.07
LINC00346Q8IVM7 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LINC00346Q8IVM7 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC14.62□□□□□ -0.07
LINC00346Q8IVM7 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LINC00346Q8IVM7 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC14.62□□□□□ -0.07
LINC00346Q8IVM7 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
LINC00346Q8IVM7 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LINC00346Q8IVM7 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
LINC00346Q8IVM7 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC14.62□□□□□ -0.07
LINC00346Q8IVM7 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
LINC00346Q8IVM7 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LINC00346Q8IVM7 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
LINC00346Q8IVM7 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LINC00346Q8IVM7 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC14.62□□□□□ -0.07
LINC00346Q8IVM7 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
LINC00346Q8IVM7 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LINC00346Q8IVM7 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC14.61□□□□□ -0.07
LINC00346Q8IVM7 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC14.61□□□□□ -0.07
LINC00346Q8IVM7 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC14.61□□□□□ -0.07
LINC00346Q8IVM7 AC007950.2-201ENST00000615045 2347 ntBASIC14.61□□□□□ -0.07
LINC00346Q8IVM7 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
LINC00346Q8IVM7 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LINC00346Q8IVM7 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC14.61□□□□□ -0.07
LINC00346Q8IVM7 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
LINC00346Q8IVM7 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC14.61□□□□□ -0.07
LINC00346Q8IVM7 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
LINC00346Q8IVM7 ABR-203ENST00000536794 2213 ntTSL 2 BASIC14.61□□□□□ -0.07
LINC00346Q8IVM7 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
LINC00346Q8IVM7 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
LINC00346Q8IVM7 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LINC00346Q8IVM7 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC14.61□□□□□ -0.07
LINC00346Q8IVM7 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LINC00346Q8IVM7 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC14.61□□□□□ -0.07
LINC00346Q8IVM7 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
LINC00346Q8IVM7 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
LINC00346Q8IVM7 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC14.61□□□□□ -0.07
LINC00346Q8IVM7 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC14.61□□□□□ -0.07
LINC00346Q8IVM7 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
LINC00346Q8IVM7 CXCL1P1-201ENST00000502804 216 ntBASIC14.61□□□□□ -0.07
LINC00346Q8IVM7 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC14.61□□□□□ -0.07
LINC00346Q8IVM7 KRT126P-201ENST00000549467 1181 ntBASIC14.61□□□□□ -0.07
LINC00346Q8IVM7 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
LINC00346Q8IVM7 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LINC00346Q8IVM7 AC116407.3-201ENST00000623905 1129 ntBASIC14.61□□□□□ -0.07
LINC00346Q8IVM7 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LINC00346Q8IVM7 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LINC00346Q8IVM7 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC14.61□□□□□ -0.07
LINC00346Q8IVM7 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LINC00346Q8IVM7 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC14.61□□□□□ -0.07
LINC00346Q8IVM7 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LINC00346Q8IVM7 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LINC00346Q8IVM7 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
LINC00346Q8IVM7 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LINC00346Q8IVM7 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
LINC00346Q8IVM7 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
LINC00346Q8IVM7 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
LINC00346Q8IVM7 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC14.61□□□□□ -0.07
LINC00346Q8IVM7 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LINC00346Q8IVM7 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
LINC00346Q8IVM7 LINC01144-201ENST00000626198 1710 ntBASIC14.61□□□□□ -0.07
LINC00346Q8IVM7 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC14.61□□□□□ -0.07
LINC00346Q8IVM7 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC14.61□□□□□ -0.07
LINC00346Q8IVM7 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LINC00346Q8IVM7 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LINC00346Q8IVM7 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
LINC00346Q8IVM7 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LINC00346Q8IVM7 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
LINC00346Q8IVM7 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
LINC00346Q8IVM7 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC14.6□□□□□ -0.07
LINC00346Q8IVM7 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
LINC00346Q8IVM7 HARS-203ENST00000431330 1774 ntTSL 2 BASIC14.6□□□□□ -0.07
LINC00346Q8IVM7 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LINC00346Q8IVM7 SP100-205ENST00000409824 1802 ntTSL 5 BASIC14.6□□□□□ -0.07
LINC00346Q8IVM7 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms