Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CCDC50Q8IVM0 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC50Q8IVM0 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC50Q8IVM0 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
CCDC50Q8IVM0 LAGE3P1-201ENST00000425356 484 ntBASIC17.47■□□□□ 0.39
CCDC50Q8IVM0 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
CCDC50Q8IVM0 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC17.47■□□□□ 0.39
CCDC50Q8IVM0 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC17.47■□□□□ 0.39
CCDC50Q8IVM0 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
CCDC50Q8IVM0 PAM16-208ENST00000573553 722 ntTSL 2 BASIC17.47■□□□□ 0.39
CCDC50Q8IVM0 METTL23-204ENST00000586752 904 ntTSL 2 BASIC17.47■□□□□ 0.39
CCDC50Q8IVM0 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC50Q8IVM0 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
CCDC50Q8IVM0 AL805961.1-202ENST00000641562 540 ntBASIC17.47■□□□□ 0.39
CCDC50Q8IVM0 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC17.47■□□□□ 0.39
CCDC50Q8IVM0 SNX33P1-201ENST00000592116 1762 ntBASIC17.47■□□□□ 0.39
CCDC50Q8IVM0 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC50Q8IVM0 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
CCDC50Q8IVM0 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC17.47■□□□□ 0.39
CCDC50Q8IVM0 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC50Q8IVM0 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC50Q8IVM0 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC50Q8IVM0 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC50Q8IVM0 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC50Q8IVM0 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC50Q8IVM0 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC50Q8IVM0 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC50Q8IVM0 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC50Q8IVM0 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC50Q8IVM0 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC50Q8IVM0 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC17.47■□□□□ 0.39
CCDC50Q8IVM0 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC50Q8IVM0 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC50Q8IVM0 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC50Q8IVM0 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC50Q8IVM0 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
CCDC50Q8IVM0 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC50Q8IVM0 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC50Q8IVM0 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC50Q8IVM0 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC17.46■□□□□ 0.39
CCDC50Q8IVM0 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC17.46■□□□□ 0.39
CCDC50Q8IVM0 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC50Q8IVM0 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC50Q8IVM0 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC50Q8IVM0 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
CCDC50Q8IVM0 PC-214ENST00000628663 1470 ntTSL 5 BASIC17.46■□□□□ 0.39
CCDC50Q8IVM0 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC50Q8IVM0 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC50Q8IVM0 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
CCDC50Q8IVM0 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC17.46■□□□□ 0.39
CCDC50Q8IVM0 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC50Q8IVM0 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC50Q8IVM0 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC50Q8IVM0 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC17.46■□□□□ 0.39
CCDC50Q8IVM0 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
CCDC50Q8IVM0 SLC25A6P2-201ENST00000497974 877 ntBASIC17.46■□□□□ 0.39
CCDC50Q8IVM0 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC50Q8IVM0 AF238378.1-201ENST00000526806 358 ntBASIC17.46■□□□□ 0.39
CCDC50Q8IVM0 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC17.46■□□□□ 0.39
CCDC50Q8IVM0 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC17.46■□□□□ 0.39
CCDC50Q8IVM0 PNMT-203ENST00000581428 677 ntTSL 2 BASIC17.46■□□□□ 0.39
CCDC50Q8IVM0 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC17.46■□□□□ 0.39
CCDC50Q8IVM0 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
CCDC50Q8IVM0 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC17.46■□□□□ 0.39
CCDC50Q8IVM0 REXO1L3P-201ENST00000622202 1288 ntBASIC17.46■□□□□ 0.39
CCDC50Q8IVM0 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
CCDC50Q8IVM0 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC50Q8IVM0 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC50Q8IVM0 AL512652.2-201ENST00000625156 1716 ntBASIC17.46■□□□□ 0.39
CCDC50Q8IVM0 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC50Q8IVM0 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC50Q8IVM0 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC50Q8IVM0 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC17.46■□□□□ 0.39
CCDC50Q8IVM0 AL031731.1-201ENST00000642131 2094 ntBASIC17.46■□□□□ 0.39
CCDC50Q8IVM0 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC17.46■□□□□ 0.39
CCDC50Q8IVM0 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC50Q8IVM0 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.38
CCDC50Q8IVM0 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC17.46■□□□□ 0.38
CCDC50Q8IVM0 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC17.45■□□□□ 0.38
CCDC50Q8IVM0 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
CCDC50Q8IVM0 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC17.45■□□□□ 0.38
CCDC50Q8IVM0 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC17.45■□□□□ 0.38
CCDC50Q8IVM0 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CCDC50Q8IVM0 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC50Q8IVM0 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC17.45■□□□□ 0.38
CCDC50Q8IVM0 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC17.45■□□□□ 0.38
CCDC50Q8IVM0 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC17.45■□□□□ 0.38
CCDC50Q8IVM0 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC50Q8IVM0 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC50Q8IVM0 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC17.45■□□□□ 0.38
CCDC50Q8IVM0 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC50Q8IVM0 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC50Q8IVM0 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC50Q8IVM0 AC091167.2-201ENST00000579581 588 ntBASIC17.45■□□□□ 0.38
CCDC50Q8IVM0 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CCDC50Q8IVM0 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC17.45■□□□□ 0.38
CCDC50Q8IVM0 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC17.45■□□□□ 0.38
CCDC50Q8IVM0 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC17.45■□□□□ 0.38
CCDC50Q8IVM0 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC50Q8IVM0 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms