Protein–RNA interactions for Protein: Q86WJ1

CHD1L, Chromodomain-helicase-DNA-binding protein 1-like, humanhuman

Predictions only

Length 897 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1LQ86WJ1 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CHD1LQ86WJ1 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC20.33■□□□□ 0.84
CHD1LQ86WJ1 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
CHD1LQ86WJ1 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
CHD1LQ86WJ1 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC20.33■□□□□ 0.84
CHD1LQ86WJ1 AC069224.1-201ENST00000566372 1715 ntBASIC20.33■□□□□ 0.84
CHD1LQ86WJ1 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CHD1LQ86WJ1 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CHD1LQ86WJ1 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CHD1LQ86WJ1 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CHD1LQ86WJ1 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CHD1LQ86WJ1 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CHD1LQ86WJ1 BCAR1-209ENST00000546196 1340 ntBASIC20.32■□□□□ 0.84
CHD1LQ86WJ1 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CHD1LQ86WJ1 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CHD1LQ86WJ1 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
CHD1LQ86WJ1 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CHD1LQ86WJ1 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CHD1LQ86WJ1 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CHD1LQ86WJ1 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC20.32■□□□□ 0.84
CHD1LQ86WJ1 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC20.32■□□□□ 0.84
CHD1LQ86WJ1 AC093724.1-201ENST00000448659 1027 ntBASIC20.32■□□□□ 0.84
CHD1LQ86WJ1 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC20.32■□□□□ 0.84
CHD1LQ86WJ1 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC20.32■□□□□ 0.84
CHD1LQ86WJ1 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC20.32■□□□□ 0.84
CHD1LQ86WJ1 MED16-214ENST00000617672 554 ntTSL 5 BASIC20.32■□□□□ 0.84
CHD1LQ86WJ1 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC20.32■□□□□ 0.84
CHD1LQ86WJ1 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CHD1LQ86WJ1 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CHD1LQ86WJ1 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CHD1LQ86WJ1 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
CHD1LQ86WJ1 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CHD1LQ86WJ1 LTF-203ENST00000426532 2494 ntTSL 2 BASIC20.32■□□□□ 0.84
CHD1LQ86WJ1 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC20.32■□□□□ 0.84
CHD1LQ86WJ1 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
CHD1LQ86WJ1 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CHD1LQ86WJ1 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC20.32■□□□□ 0.84
CHD1LQ86WJ1 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CHD1LQ86WJ1 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
CHD1LQ86WJ1 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC20.32■□□□□ 0.84
CHD1LQ86WJ1 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC20.32■□□□□ 0.84
CHD1LQ86WJ1 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC20.32■□□□□ 0.84
CHD1LQ86WJ1 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
CHD1LQ86WJ1 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CHD1LQ86WJ1 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CHD1LQ86WJ1 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC20.31■□□□□ 0.84
CHD1LQ86WJ1 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC20.31■□□□□ 0.84
CHD1LQ86WJ1 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC20.31■□□□□ 0.84
CHD1LQ86WJ1 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CHD1LQ86WJ1 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC20.31■□□□□ 0.84
CHD1LQ86WJ1 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CHD1LQ86WJ1 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CHD1LQ86WJ1 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
CHD1LQ86WJ1 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CHD1LQ86WJ1 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CHD1LQ86WJ1 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CHD1LQ86WJ1 MIR648-201ENST00000385046 94 ntBASIC20.31■□□□□ 0.84
CHD1LQ86WJ1 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC20.31■□□□□ 0.84
CHD1LQ86WJ1 LBH-204ENST00000406087 559 ntTSL 4 BASIC20.31■□□□□ 0.84
CHD1LQ86WJ1 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC20.31■□□□□ 0.84
CHD1LQ86WJ1 RPL13AP23-201ENST00000480739 586 ntBASIC20.31■□□□□ 0.84
CHD1LQ86WJ1 NMU-203ENST00000507338 658 ntTSL 3 BASIC20.31■□□□□ 0.84
CHD1LQ86WJ1 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC20.31■□□□□ 0.84
CHD1LQ86WJ1 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC20.31■□□□□ 0.84
CHD1LQ86WJ1 KRT19P2-202ENST00000557173 1012 ntBASIC20.31■□□□□ 0.84
CHD1LQ86WJ1 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC20.31■□□□□ 0.84
CHD1LQ86WJ1 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC20.31■□□□□ 0.84
CHD1LQ86WJ1 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC20.31■□□□□ 0.84
CHD1LQ86WJ1 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC20.31■□□□□ 0.84
CHD1LQ86WJ1 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CHD1LQ86WJ1 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
CHD1LQ86WJ1 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CHD1LQ86WJ1 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CHD1LQ86WJ1 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CHD1LQ86WJ1 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CHD1LQ86WJ1 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CHD1LQ86WJ1 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CHD1LQ86WJ1 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CHD1LQ86WJ1 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
CHD1LQ86WJ1 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
CHD1LQ86WJ1 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
CHD1LQ86WJ1 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CHD1LQ86WJ1 IL9RP2-201ENST00000423948 1312 ntBASIC20.3■□□□□ 0.84
CHD1LQ86WJ1 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CHD1LQ86WJ1 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC20.3■□□□□ 0.84
CHD1LQ86WJ1 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CHD1LQ86WJ1 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC20.3■□□□□ 0.84
CHD1LQ86WJ1 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CHD1LQ86WJ1 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
CHD1LQ86WJ1 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CHD1LQ86WJ1 AC007967.2-201ENST00000432613 625 ntBASIC20.3■□□□□ 0.84
CHD1LQ86WJ1 FIS1-203ENST00000442303 631 ntTSL 3 BASIC20.3■□□□□ 0.84
CHD1LQ86WJ1 FDX1P1-201ENST00000449115 551 ntBASIC20.3■□□□□ 0.84
CHD1LQ86WJ1 CFL1-202ENST00000524553 860 ntTSL 2 BASIC20.3■□□□□ 0.84
CHD1LQ86WJ1 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC20.3■□□□□ 0.84
CHD1LQ86WJ1 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC20.3■□□□□ 0.84
CHD1LQ86WJ1 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC20.3■□□□□ 0.84
CHD1LQ86WJ1 AL078644.1-201ENST00000609881 752 ntBASIC20.3■□□□□ 0.84
CHD1LQ86WJ1 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC20.3■□□□□ 0.84
CHD1LQ86WJ1 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms