Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF43Q68DV7 AC132872.4-202ENST00000622924 2756 ntBASIC17.3■□□□□ 0.36
RNF43Q68DV7 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
RNF43Q68DV7 AC012569.1-201ENST00000591191 1524 ntBASIC17.3■□□□□ 0.36
RNF43Q68DV7 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC17.3■□□□□ 0.36
RNF43Q68DV7 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
RNF43Q68DV7 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
RNF43Q68DV7 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RNF43Q68DV7 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC17.3■□□□□ 0.36
RNF43Q68DV7 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF43Q68DV7 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RNF43Q68DV7 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF43Q68DV7 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
RNF43Q68DV7 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RNF43Q68DV7 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF43Q68DV7 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
RNF43Q68DV7 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF43Q68DV7 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF43Q68DV7 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC17.29■□□□□ 0.36
RNF43Q68DV7 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
RNF43Q68DV7 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
RNF43Q68DV7 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
RNF43Q68DV7 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
RNF43Q68DV7 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF43Q68DV7 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF43Q68DV7 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC17.29■□□□□ 0.36
RNF43Q68DV7 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
RNF43Q68DV7 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RNF43Q68DV7 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RNF43Q68DV7 NEK7-201ENST00000367383 586 ntTSL 2 BASIC17.29■□□□□ 0.36
RNF43Q68DV7 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC17.29■□□□□ 0.36
RNF43Q68DV7 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC17.29■□□□□ 0.36
RNF43Q68DV7 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC17.29■□□□□ 0.36
RNF43Q68DV7 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC17.29■□□□□ 0.36
RNF43Q68DV7 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RNF43Q68DV7 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF43Q68DV7 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF43Q68DV7 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
RNF43Q68DV7 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF43Q68DV7 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RNF43Q68DV7 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF43Q68DV7 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC17.29■□□□□ 0.36
RNF43Q68DV7 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RNF43Q68DV7 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC17.29■□□□□ 0.36
RNF43Q68DV7 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
RNF43Q68DV7 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC17.29■□□□□ 0.36
RNF43Q68DV7 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF43Q68DV7 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC17.29■□□□□ 0.36
RNF43Q68DV7 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC17.29■□□□□ 0.36
RNF43Q68DV7 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF43Q68DV7 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF43Q68DV7 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC17.29■□□□□ 0.36
RNF43Q68DV7 AL021920.2-201ENST00000624828 1351 ntBASIC17.28■□□□□ 0.36
RNF43Q68DV7 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
RNF43Q68DV7 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RNF43Q68DV7 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF43Q68DV7 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
RNF43Q68DV7 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF43Q68DV7 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC17.28■□□□□ 0.36
RNF43Q68DV7 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC17.28■□□□□ 0.36
RNF43Q68DV7 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RNF43Q68DV7 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RNF43Q68DV7 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
RNF43Q68DV7 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
RNF43Q68DV7 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF43Q68DV7 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RNF43Q68DV7 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF43Q68DV7 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
RNF43Q68DV7 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC17.28■□□□□ 0.36
RNF43Q68DV7 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF43Q68DV7 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RNF43Q68DV7 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC17.28■□□□□ 0.36
RNF43Q68DV7 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF43Q68DV7 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF43Q68DV7 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF43Q68DV7 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC17.28■□□□□ 0.36
RNF43Q68DV7 AL355306.1-201ENST00000415580 579 ntBASIC17.28■□□□□ 0.36
RNF43Q68DV7 AC005034.1-201ENST00000426657 489 ntBASIC17.28■□□□□ 0.36
RNF43Q68DV7 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
RNF43Q68DV7 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC17.28■□□□□ 0.36
RNF43Q68DV7 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
RNF43Q68DV7 PUDP-206ENST00000540122 825 ntTSL 2 BASIC17.28■□□□□ 0.36
RNF43Q68DV7 INO80C-206ENST00000586489 594 ntTSL 3 BASIC17.28■□□□□ 0.36
RNF43Q68DV7 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RNF43Q68DV7 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC17.28■□□□□ 0.36
RNF43Q68DV7 AC105339.1-204ENST00000636249 355 ntBASIC17.28■□□□□ 0.36
RNF43Q68DV7 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC17.28■□□□□ 0.36
RNF43Q68DV7 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF43Q68DV7 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
RNF43Q68DV7 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.28■□□□□ 0.36
RNF43Q68DV7 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF43Q68DV7 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF43Q68DV7 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF43Q68DV7 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC17.28■□□□□ 0.36
RNF43Q68DV7 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF43Q68DV7 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RNF43Q68DV7 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RNF43Q68DV7 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
RNF43Q68DV7 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF43Q68DV7 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms