Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 NOP2-211ENST00000540228 668 ntTSL 2 BASIC16.02■□□□□ 0.16
LYSMD4Q5XG99 AC092552.1-201ENST00000547243 906 ntBASIC16.02■□□□□ 0.16
LYSMD4Q5XG99 SNX29P1-201ENST00000548357 1007 ntBASIC16.02■□□□□ 0.16
LYSMD4Q5XG99 RARRES2P5-201ENST00000564013 466 ntBASIC16.02■□□□□ 0.16
LYSMD4Q5XG99 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC16.02■□□□□ 0.16
LYSMD4Q5XG99 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC16.02■□□□□ 0.16
LYSMD4Q5XG99 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
LYSMD4Q5XG99 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
LYSMD4Q5XG99 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC16.02■□□□□ 0.16
LYSMD4Q5XG99 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
LYSMD4Q5XG99 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.02■□□□□ 0.15
LYSMD4Q5XG99 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC16.02■□□□□ 0.15
LYSMD4Q5XG99 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
LYSMD4Q5XG99 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC16.02■□□□□ 0.15
LYSMD4Q5XG99 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC16.02■□□□□ 0.15
LYSMD4Q5XG99 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
LYSMD4Q5XG99 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
LYSMD4Q5XG99 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
LYSMD4Q5XG99 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
LYSMD4Q5XG99 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC16.02■□□□□ 0.15
LYSMD4Q5XG99 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
LYSMD4Q5XG99 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LYSMD4Q5XG99 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC16.01■□□□□ 0.15
LYSMD4Q5XG99 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
LYSMD4Q5XG99 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC16.01■□□□□ 0.15
LYSMD4Q5XG99 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LYSMD4Q5XG99 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC16.01■□□□□ 0.15
LYSMD4Q5XG99 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LYSMD4Q5XG99 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LYSMD4Q5XG99 AC067852.2-201ENST00000590513 2313 ntBASIC16.01■□□□□ 0.15
LYSMD4Q5XG99 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LYSMD4Q5XG99 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
LYSMD4Q5XG99 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LYSMD4Q5XG99 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC16.01■□□□□ 0.15
LYSMD4Q5XG99 FST-202ENST00000396947 2538 ntTSL 5 BASIC16.01■□□□□ 0.15
LYSMD4Q5XG99 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LYSMD4Q5XG99 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LYSMD4Q5XG99 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
LYSMD4Q5XG99 REXO1L6P-201ENST00000603433 1515 ntBASIC16.01■□□□□ 0.15
LYSMD4Q5XG99 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
LYSMD4Q5XG99 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC16.01■□□□□ 0.15
LYSMD4Q5XG99 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LYSMD4Q5XG99 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LYSMD4Q5XG99 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LYSMD4Q5XG99 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC16.01■□□□□ 0.15
LYSMD4Q5XG99 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LYSMD4Q5XG99 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
LYSMD4Q5XG99 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC16.01■□□□□ 0.15
LYSMD4Q5XG99 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC16.01■□□□□ 0.15
LYSMD4Q5XG99 RHOA-206ENST00000454011 889 ntTSL 2 BASIC16.01■□□□□ 0.15
LYSMD4Q5XG99 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC16.01■□□□□ 0.15
LYSMD4Q5XG99 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC16.01■□□□□ 0.15
LYSMD4Q5XG99 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
LYSMD4Q5XG99 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC16.01■□□□□ 0.15
LYSMD4Q5XG99 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC16.01■□□□□ 0.15
LYSMD4Q5XG99 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
LYSMD4Q5XG99 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC16.01■□□□□ 0.15
LYSMD4Q5XG99 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC16.01■□□□□ 0.15
LYSMD4Q5XG99 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC16.01■□□□□ 0.15
LYSMD4Q5XG99 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC16.01■□□□□ 0.15
LYSMD4Q5XG99 MIR4525-201ENST00000580000 75 ntBASIC16.01■□□□□ 0.15
LYSMD4Q5XG99 AC025048.3-201ENST00000590609 569 ntBASIC16.01■□□□□ 0.15
LYSMD4Q5XG99 AC005702.4-201ENST00000618393 416 ntBASIC16.01■□□□□ 0.15
LYSMD4Q5XG99 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LYSMD4Q5XG99 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LYSMD4Q5XG99 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LYSMD4Q5XG99 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LYSMD4Q5XG99 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC16.01■□□□□ 0.15
LYSMD4Q5XG99 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LYSMD4Q5XG99 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LYSMD4Q5XG99 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
LYSMD4Q5XG99 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC16.01■□□□□ 0.15
LYSMD4Q5XG99 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
LYSMD4Q5XG99 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LYSMD4Q5XG99 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC16■□□□□ 0.15
LYSMD4Q5XG99 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC16■□□□□ 0.15
LYSMD4Q5XG99 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
LYSMD4Q5XG99 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
LYSMD4Q5XG99 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LYSMD4Q5XG99 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LYSMD4Q5XG99 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
LYSMD4Q5XG99 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LYSMD4Q5XG99 AL031731.1-201ENST00000642131 2094 ntBASIC16■□□□□ 0.15
LYSMD4Q5XG99 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
LYSMD4Q5XG99 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
LYSMD4Q5XG99 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC16■□□□□ 0.15
LYSMD4Q5XG99 FO393414.2-201ENST00000405153 598 ntBASIC16■□□□□ 0.15
LYSMD4Q5XG99 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC16■□□□□ 0.15
LYSMD4Q5XG99 CROCCP4-201ENST00000457096 498 ntBASIC16■□□□□ 0.15
LYSMD4Q5XG99 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC16■□□□□ 0.15
LYSMD4Q5XG99 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC16■□□□□ 0.15
LYSMD4Q5XG99 PTK7-212ENST00000476760 902 ntTSL 2 BASIC16■□□□□ 0.15
LYSMD4Q5XG99 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LYSMD4Q5XG99 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC16■□□□□ 0.15
LYSMD4Q5XG99 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC16■□□□□ 0.15
LYSMD4Q5XG99 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC16■□□□□ 0.15
LYSMD4Q5XG99 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC16■□□□□ 0.15
LYSMD4Q5XG99 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
LYSMD4Q5XG99 AC010319.3-201ENST00000597028 470 ntBASIC16■□□□□ 0.15
LYSMD4Q5XG99 PFAS-212ENST00000625942 396 ntTSL 5 BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms