Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TRIM71Q2Q1W2 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC17.81■□□□□ 0.44
TRIM71Q2Q1W2 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TRIM71Q2Q1W2 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC17.81■□□□□ 0.44
TRIM71Q2Q1W2 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC17.81■□□□□ 0.44
TRIM71Q2Q1W2 KRT17P8-201ENST00000540749 863 ntBASIC17.81■□□□□ 0.44
TRIM71Q2Q1W2 AC123567.1-201ENST00000548294 1261 ntBASIC17.81■□□□□ 0.44
TRIM71Q2Q1W2 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC17.81■□□□□ 0.44
TRIM71Q2Q1W2 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
TRIM71Q2Q1W2 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC17.81■□□□□ 0.44
TRIM71Q2Q1W2 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
TRIM71Q2Q1W2 AC025048.3-201ENST00000590609 569 ntBASIC17.81■□□□□ 0.44
TRIM71Q2Q1W2 AC017083.2-201ENST00000608069 979 ntBASIC17.81■□□□□ 0.44
TRIM71Q2Q1W2 AC005702.4-201ENST00000618393 416 ntBASIC17.81■□□□□ 0.44
TRIM71Q2Q1W2 SERF2-217ENST00000630046 862 ntTSL 5 BASIC17.81■□□□□ 0.44
TRIM71Q2Q1W2 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRIM71Q2Q1W2 AC018470.1-201ENST00000624790 3129 ntBASIC17.81■□□□□ 0.44
TRIM71Q2Q1W2 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC17.81■□□□□ 0.44
TRIM71Q2Q1W2 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TRIM71Q2Q1W2 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TRIM71Q2Q1W2 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC17.81■□□□□ 0.44
TRIM71Q2Q1W2 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
TRIM71Q2Q1W2 AL133373.2-201ENST00000623187 2828 ntBASIC17.8■□□□□ 0.44
TRIM71Q2Q1W2 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM71Q2Q1W2 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM71Q2Q1W2 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.8■□□□□ 0.44
TRIM71Q2Q1W2 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM71Q2Q1W2 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC17.8■□□□□ 0.44
TRIM71Q2Q1W2 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM71Q2Q1W2 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM71Q2Q1W2 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM71Q2Q1W2 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM71Q2Q1W2 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM71Q2Q1W2 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM71Q2Q1W2 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM71Q2Q1W2 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC17.8■□□□□ 0.44
TRIM71Q2Q1W2 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC17.8■□□□□ 0.44
TRIM71Q2Q1W2 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC17.8■□□□□ 0.44
TRIM71Q2Q1W2 PTK7-212ENST00000476760 902 ntTSL 2 BASIC17.8■□□□□ 0.44
TRIM71Q2Q1W2 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC17.8■□□□□ 0.44
TRIM71Q2Q1W2 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC17.8■□□□□ 0.44
TRIM71Q2Q1W2 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC17.8■□□□□ 0.44
TRIM71Q2Q1W2 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC17.8■□□□□ 0.44
TRIM71Q2Q1W2 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC17.8■□□□□ 0.44
TRIM71Q2Q1W2 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM71Q2Q1W2 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC17.8■□□□□ 0.44
TRIM71Q2Q1W2 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
TRIM71Q2Q1W2 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM71Q2Q1W2 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
TRIM71Q2Q1W2 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM71Q2Q1W2 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC17.8■□□□□ 0.44
TRIM71Q2Q1W2 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM71Q2Q1W2 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
TRIM71Q2Q1W2 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC17.8■□□□□ 0.44
TRIM71Q2Q1W2 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM71Q2Q1W2 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
TRIM71Q2Q1W2 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.79■□□□□ 0.44
TRIM71Q2Q1W2 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM71Q2Q1W2 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC17.79■□□□□ 0.44
TRIM71Q2Q1W2 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM71Q2Q1W2 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM71Q2Q1W2 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM71Q2Q1W2 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM71Q2Q1W2 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM71Q2Q1W2 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC17.79■□□□□ 0.44
TRIM71Q2Q1W2 AL136982.4-201ENST00000437689 1740 ntBASIC17.79■□□□□ 0.44
TRIM71Q2Q1W2 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM71Q2Q1W2 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC17.79■□□□□ 0.44
TRIM71Q2Q1W2 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM71Q2Q1W2 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC17.79■□□□□ 0.44
TRIM71Q2Q1W2 FADS2-205ENST00000517839 469 ntTSL 3 BASIC17.79■□□□□ 0.44
TRIM71Q2Q1W2 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC17.79■□□□□ 0.44
TRIM71Q2Q1W2 FUZ-207ENST00000526575 482 ntTSL 4 BASIC17.79■□□□□ 0.44
TRIM71Q2Q1W2 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC17.79■□□□□ 0.44
TRIM71Q2Q1W2 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC17.79■□□□□ 0.44
TRIM71Q2Q1W2 APOC4-201ENST00000591600 348 ntTSL 3 BASIC17.79■□□□□ 0.44
TRIM71Q2Q1W2 AC093726.1-201ENST00000608064 963 ntBASIC17.79■□□□□ 0.44
TRIM71Q2Q1W2 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC17.79■□□□□ 0.44
TRIM71Q2Q1W2 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM71Q2Q1W2 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM71Q2Q1W2 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.79■□□□□ 0.44
TRIM71Q2Q1W2 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM71Q2Q1W2 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM71Q2Q1W2 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM71Q2Q1W2 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM71Q2Q1W2 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM71Q2Q1W2 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM71Q2Q1W2 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
TRIM71Q2Q1W2 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
TRIM71Q2Q1W2 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
TRIM71Q2Q1W2 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC17.78■□□□□ 0.44
TRIM71Q2Q1W2 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM71Q2Q1W2 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM71Q2Q1W2 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM71Q2Q1W2 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM71Q2Q1W2 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM71Q2Q1W2 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
TRIM71Q2Q1W2 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM71Q2Q1W2 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.78■□□□□ 0.44
TRIM71Q2Q1W2 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms