Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CTC1Q2NKJ3 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CTC1Q2NKJ3 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CTC1Q2NKJ3 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CTC1Q2NKJ3 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.56■□□□□ 0.4
CTC1Q2NKJ3 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CTC1Q2NKJ3 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CTC1Q2NKJ3 OS9-205ENST00000413095 1660 ntTSL 2 BASIC17.56■□□□□ 0.4
CTC1Q2NKJ3 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CTC1Q2NKJ3 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CTC1Q2NKJ3 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CTC1Q2NKJ3 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC17.56■□□□□ 0.4
CTC1Q2NKJ3 RN7SL752P-201ENST00000463779 287 ntBASIC17.56■□□□□ 0.4
CTC1Q2NKJ3 ZNF890P-202ENST00000530367 1156 ntBASIC17.56■□□□□ 0.4
CTC1Q2NKJ3 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC17.56■□□□□ 0.4
CTC1Q2NKJ3 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC17.56■□□□□ 0.4
CTC1Q2NKJ3 AP001350.2-201ENST00000625104 1094 ntBASIC17.56■□□□□ 0.4
CTC1Q2NKJ3 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC17.56■□□□□ 0.4
CTC1Q2NKJ3 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CTC1Q2NKJ3 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
CTC1Q2NKJ3 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
CTC1Q2NKJ3 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CTC1Q2NKJ3 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC17.56■□□□□ 0.4
CTC1Q2NKJ3 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC17.56■□□□□ 0.4
CTC1Q2NKJ3 LYSMD4-203ENST00000378904 2122 ntBASIC17.56■□□□□ 0.4
CTC1Q2NKJ3 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CTC1Q2NKJ3 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC17.56■□□□□ 0.4
CTC1Q2NKJ3 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC17.55■□□□□ 0.4
CTC1Q2NKJ3 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
CTC1Q2NKJ3 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC17.55■□□□□ 0.4
CTC1Q2NKJ3 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CTC1Q2NKJ3 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CTC1Q2NKJ3 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CTC1Q2NKJ3 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC17.55■□□□□ 0.4
CTC1Q2NKJ3 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC17.55■□□□□ 0.4
CTC1Q2NKJ3 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CTC1Q2NKJ3 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CTC1Q2NKJ3 CETN4P-206ENST00000642099 2168 ntBASIC17.55■□□□□ 0.4
CTC1Q2NKJ3 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC17.55■□□□□ 0.4
CTC1Q2NKJ3 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CTC1Q2NKJ3 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CTC1Q2NKJ3 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CTC1Q2NKJ3 HLA-H-201ENST00000383620 1096 ntBASIC17.55■□□□□ 0.4
CTC1Q2NKJ3 AC112492.5-201ENST00000421897 457 ntBASIC17.55■□□□□ 0.4
CTC1Q2NKJ3 AC245100.3-201ENST00000441281 285 ntBASIC17.55■□□□□ 0.4
CTC1Q2NKJ3 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC17.55■□□□□ 0.4
CTC1Q2NKJ3 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC17.55■□□□□ 0.4
CTC1Q2NKJ3 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC17.55■□□□□ 0.4
CTC1Q2NKJ3 LITAF-210ENST00000571976 548 ntTSL 2 BASIC17.55■□□□□ 0.4
CTC1Q2NKJ3 LITAF-214ENST00000574703 486 ntTSL 2 BASIC17.55■□□□□ 0.4
CTC1Q2NKJ3 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC17.55■□□□□ 0.4
CTC1Q2NKJ3 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.55■□□□□ 0.4
CTC1Q2NKJ3 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC17.55■□□□□ 0.4
CTC1Q2NKJ3 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CTC1Q2NKJ3 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CTC1Q2NKJ3 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17.55■□□□□ 0.4
CTC1Q2NKJ3 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CTC1Q2NKJ3 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CTC1Q2NKJ3 BTBD7P1-201ENST00000447253 1453 ntBASIC17.55■□□□□ 0.4
CTC1Q2NKJ3 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CTC1Q2NKJ3 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CTC1Q2NKJ3 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CTC1Q2NKJ3 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC17.55■□□□□ 0.4
CTC1Q2NKJ3 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CTC1Q2NKJ3 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
CTC1Q2NKJ3 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CTC1Q2NKJ3 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CTC1Q2NKJ3 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.54■□□□□ 0.4
CTC1Q2NKJ3 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CTC1Q2NKJ3 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC17.54■□□□□ 0.4
CTC1Q2NKJ3 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CTC1Q2NKJ3 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC17.54■□□□□ 0.4
CTC1Q2NKJ3 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CTC1Q2NKJ3 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CTC1Q2NKJ3 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CTC1Q2NKJ3 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
CTC1Q2NKJ3 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CTC1Q2NKJ3 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC17.54■□□□□ 0.4
CTC1Q2NKJ3 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CTC1Q2NKJ3 AC087499.6-201ENST00000411576 835 ntBASIC17.54■□□□□ 0.4
CTC1Q2NKJ3 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC17.54■□□□□ 0.4
CTC1Q2NKJ3 GNAQP1-201ENST00000444815 1067 ntBASIC17.54■□□□□ 0.4
CTC1Q2NKJ3 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CTC1Q2NKJ3 KRT17P8-201ENST00000540749 863 ntBASIC17.54■□□□□ 0.4
CTC1Q2NKJ3 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC17.54■□□□□ 0.4
CTC1Q2NKJ3 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC17.54■□□□□ 0.4
CTC1Q2NKJ3 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CTC1Q2NKJ3 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CTC1Q2NKJ3 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
CTC1Q2NKJ3 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CTC1Q2NKJ3 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
CTC1Q2NKJ3 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CTC1Q2NKJ3 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
CTC1Q2NKJ3 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CTC1Q2NKJ3 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
CTC1Q2NKJ3 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CTC1Q2NKJ3 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC17.54■□□□□ 0.4
CTC1Q2NKJ3 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CTC1Q2NKJ3 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CTC1Q2NKJ3 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms