Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC19.16■□□□□ 0.66
IRX3P78415 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
IRX3P78415 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC19.16■□□□□ 0.66
IRX3P78415 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC19.16■□□□□ 0.66
IRX3P78415 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC19.16■□□□□ 0.66
IRX3P78415 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
IRX3P78415 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC19.16■□□□□ 0.66
IRX3P78415 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
IRX3P78415 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC19.16■□□□□ 0.66
IRX3P78415 LITAF-210ENST00000571976 548 ntTSL 2 BASIC19.16■□□□□ 0.66
IRX3P78415 LITAF-214ENST00000574703 486 ntTSL 2 BASIC19.16■□□□□ 0.66
IRX3P78415 SSH2-210ENST00000582084 560 ntTSL 3 BASIC19.16■□□□□ 0.66
IRX3P78415 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC19.16■□□□□ 0.66
IRX3P78415 TEX28P1-201ENST00000613479 1221 ntBASIC19.16■□□□□ 0.66
IRX3P78415 TEX28P2-201ENST00000617764 1221 ntBASIC19.16■□□□□ 0.66
IRX3P78415 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
IRX3P78415 TCAF2P1-201ENST00000291129 2421 ntBASIC19.16■□□□□ 0.66
IRX3P78415 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
IRX3P78415 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
IRX3P78415 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
IRX3P78415 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
IRX3P78415 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC19.16■□□□□ 0.66
IRX3P78415 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
IRX3P78415 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC19.16■□□□□ 0.66
IRX3P78415 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
IRX3P78415 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC19.15■□□□□ 0.66
IRX3P78415 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
IRX3P78415 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
IRX3P78415 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
IRX3P78415 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
IRX3P78415 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC19.15■□□□□ 0.66
IRX3P78415 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
IRX3P78415 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
IRX3P78415 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
IRX3P78415 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
IRX3P78415 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
IRX3P78415 GNE-204ENST00000539208 2190 ntTSL 2 BASIC19.15■□□□□ 0.66
IRX3P78415 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
IRX3P78415 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
IRX3P78415 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
IRX3P78415 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
IRX3P78415 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
IRX3P78415 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
IRX3P78415 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
IRX3P78415 COX5BP8-201ENST00000416911 349 ntBASIC19.15■□□□□ 0.66
IRX3P78415 AC009477.1-201ENST00000452936 217 ntBASIC19.15■□□□□ 0.66
IRX3P78415 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
IRX3P78415 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC19.15■□□□□ 0.66
IRX3P78415 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC19.15■□□□□ 0.66
IRX3P78415 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC19.15■□□□□ 0.66
IRX3P78415 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC19.15■□□□□ 0.66
IRX3P78415 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC19.15■□□□□ 0.66
IRX3P78415 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
IRX3P78415 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC19.15■□□□□ 0.66
IRX3P78415 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
IRX3P78415 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC19.15■□□□□ 0.66
IRX3P78415 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
IRX3P78415 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
IRX3P78415 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
IRX3P78415 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC19.15■□□□□ 0.66
IRX3P78415 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
IRX3P78415 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC19.15■□□□□ 0.66
IRX3P78415 CROCCP2-202ENST00000412962 2773 ntBASIC19.15■□□□□ 0.66
IRX3P78415 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
IRX3P78415 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
IRX3P78415 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
IRX3P78415 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC19.14■□□□□ 0.66
IRX3P78415 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
IRX3P78415 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC19.14■□□□□ 0.66
IRX3P78415 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
IRX3P78415 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
IRX3P78415 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
IRX3P78415 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
IRX3P78415 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
IRX3P78415 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC19.14■□□□□ 0.65
IRX3P78415 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
IRX3P78415 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
IRX3P78415 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
IRX3P78415 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
IRX3P78415 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
IRX3P78415 OR8S1-201ENST00000310194 1080 ntBASIC19.14■□□□□ 0.65
IRX3P78415 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC19.14■□□□□ 0.65
IRX3P78415 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
IRX3P78415 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
IRX3P78415 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC19.14■□□□□ 0.65
IRX3P78415 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC19.14■□□□□ 0.65
IRX3P78415 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC19.14■□□□□ 0.65
IRX3P78415 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC19.14■□□□□ 0.65
IRX3P78415 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
IRX3P78415 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC19.14■□□□□ 0.65
IRX3P78415 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
IRX3P78415 KRT17P7-201ENST00000451704 1104 ntBASIC19.14■□□□□ 0.65
IRX3P78415 HLA-J-202ENST00000469281 1241 ntBASIC19.14■□□□□ 0.65
IRX3P78415 RNA5SP410-201ENST00000516285 106 ntBASIC19.14■□□□□ 0.65
IRX3P78415 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC19.14■□□□□ 0.65
IRX3P78415 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
IRX3P78415 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
IRX3P78415 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC19.14■□□□□ 0.65
IRX3P78415 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC19.14■□□□□ 0.65
IRX3P78415 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms