Protein–RNA interactions for Protein: P53708

ITGA8, Integrin alpha-8, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA8P53708 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC16.94■□□□□ 0.3
ITGA8P53708 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
ITGA8P53708 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ITGA8P53708 BSG-214ENST00000614867 960 ntTSL 3 BASIC16.94■□□□□ 0.3
ITGA8P53708 AP001350.2-201ENST00000625104 1094 ntBASIC16.94■□□□□ 0.3
ITGA8P53708 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC16.94■□□□□ 0.3
ITGA8P53708 AMT-233ENST00000636522 1620 ntTSL 2 BASIC16.94■□□□□ 0.3
ITGA8P53708 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
ITGA8P53708 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ITGA8P53708 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ITGA8P53708 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
ITGA8P53708 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
ITGA8P53708 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
ITGA8P53708 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC16.94■□□□□ 0.3
ITGA8P53708 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC16.94■□□□□ 0.3
ITGA8P53708 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
ITGA8P53708 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ITGA8P53708 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
ITGA8P53708 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ITGA8P53708 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
ITGA8P53708 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
ITGA8P53708 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
ITGA8P53708 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
ITGA8P53708 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC16.93■□□□□ 0.3
ITGA8P53708 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
ITGA8P53708 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ITGA8P53708 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC16.93■□□□□ 0.3
ITGA8P53708 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ITGA8P53708 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
ITGA8P53708 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC16.93■□□□□ 0.3
ITGA8P53708 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
ITGA8P53708 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
ITGA8P53708 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ITGA8P53708 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ITGA8P53708 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ITGA8P53708 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ITGA8P53708 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC16.93■□□□□ 0.3
ITGA8P53708 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
ITGA8P53708 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC16.93■□□□□ 0.3
ITGA8P53708 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
ITGA8P53708 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ITGA8P53708 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
ITGA8P53708 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ITGA8P53708 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC16.93■□□□□ 0.3
ITGA8P53708 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC16.93■□□□□ 0.3
ITGA8P53708 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
ITGA8P53708 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC16.93■□□□□ 0.3
ITGA8P53708 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC16.93■□□□□ 0.3
ITGA8P53708 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
ITGA8P53708 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC16.93■□□□□ 0.3
ITGA8P53708 AC020765.3-201ENST00000613051 740 ntBASIC16.93■□□□□ 0.3
ITGA8P53708 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC16.93■□□□□ 0.3
ITGA8P53708 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC16.93■□□□□ 0.3
ITGA8P53708 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ITGA8P53708 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ITGA8P53708 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC16.93■□□□□ 0.3
ITGA8P53708 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
ITGA8P53708 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
ITGA8P53708 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
ITGA8P53708 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
ITGA8P53708 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
ITGA8P53708 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
ITGA8P53708 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC16.92■□□□□ 0.3
ITGA8P53708 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC16.92■□□□□ 0.3
ITGA8P53708 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC16.92■□□□□ 0.3
ITGA8P53708 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ITGA8P53708 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ITGA8P53708 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
ITGA8P53708 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
ITGA8P53708 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC16.92■□□□□ 0.3
ITGA8P53708 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC16.92■□□□□ 0.3
ITGA8P53708 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC16.92■□□□□ 0.3
ITGA8P53708 CYGB-205ENST00000590175 830 ntTSL 3 BASIC16.92■□□□□ 0.3
ITGA8P53708 AC008608.2-201ENST00000606089 416 ntBASIC16.92■□□□□ 0.3
ITGA8P53708 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC16.92■□□□□ 0.3
ITGA8P53708 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
ITGA8P53708 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC16.92■□□□□ 0.3
ITGA8P53708 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
ITGA8P53708 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC16.92■□□□□ 0.3
ITGA8P53708 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ITGA8P53708 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
ITGA8P53708 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC16.92■□□□□ 0.3
ITGA8P53708 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
ITGA8P53708 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
ITGA8P53708 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ITGA8P53708 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
ITGA8P53708 AC023824.1-201ENST00000562945 2975 ntBASIC16.92■□□□□ 0.3
ITGA8P53708 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
ITGA8P53708 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
ITGA8P53708 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ITGA8P53708 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ITGA8P53708 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ITGA8P53708 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC16.91■□□□□ 0.3
ITGA8P53708 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
ITGA8P53708 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
ITGA8P53708 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ITGA8P53708 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ITGA8P53708 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
ITGA8P53708 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC16.91■□□□□ 0.3
ITGA8P53708 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms