Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC15.02□□□□□ -0.01
CENPAP49450 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
CENPAP49450 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CENPAP49450 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CENPAP49450 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC15.01□□□□□ -0.01
CENPAP49450 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CENPAP49450 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC15.01□□□□□ -0.01
CENPAP49450 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC15.01□□□□□ -0.01
CENPAP49450 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CENPAP49450 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
CENPAP49450 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC15.01□□□□□ -0.01
CENPAP49450 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CENPAP49450 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC15.01□□□□□ -0.01
CENPAP49450 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC15.01□□□□□ -0.01
CENPAP49450 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CENPAP49450 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC15.01□□□□□ -0.01
CENPAP49450 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
CENPAP49450 AL513523.2-202ENST00000427283 2040 ntBASIC15.01□□□□□ -0.01
CENPAP49450 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
CENPAP49450 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CENPAP49450 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CENPAP49450 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CENPAP49450 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC15.01□□□□□ -0.01
CENPAP49450 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC15.01□□□□□ -0.01
CENPAP49450 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CENPAP49450 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CENPAP49450 IRF8-202ENST00000562492 946 ntTSL 3 BASIC15.01□□□□□ -0.01
CENPAP49450 METTL23-204ENST00000586752 904 ntTSL 2 BASIC15.01□□□□□ -0.01
CENPAP49450 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC15.01□□□□□ -0.01
CENPAP49450 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC15.01□□□□□ -0.01
CENPAP49450 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CENPAP49450 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CENPAP49450 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC15.01□□□□□ -0.01
CENPAP49450 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CENPAP49450 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CENPAP49450 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CENPAP49450 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
CENPAP49450 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
CENPAP49450 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CENPAP49450 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CENPAP49450 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC15.01□□□□□ -0.01
CENPAP49450 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC15.01□□□□□ -0.01
CENPAP49450 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
CENPAP49450 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC15.01□□□□□ -0.01
CENPAP49450 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CENPAP49450 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
CENPAP49450 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CENPAP49450 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CENPAP49450 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CENPAP49450 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CENPAP49450 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
CENPAP49450 LINC02199-201ENST00000506655 2702 ntBASIC15.01□□□□□ -0.01
CENPAP49450 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CENPAP49450 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC15.01□□□□□ -0.01
CENPAP49450 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC15□□□□□ -0.01
CENPAP49450 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
CENPAP49450 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC15□□□□□ -0.01
CENPAP49450 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC15□□□□□ -0.01
CENPAP49450 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CENPAP49450 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC15□□□□□ -0.01
CENPAP49450 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC15□□□□□ -0.01
CENPAP49450 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC15□□□□□ -0.01
CENPAP49450 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
CENPAP49450 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CENPAP49450 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CENPAP49450 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CENPAP49450 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CENPAP49450 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CENPAP49450 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
CENPAP49450 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CENPAP49450 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CENPAP49450 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC15□□□□□ -0.01
CENPAP49450 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC15□□□□□ -0.01
CENPAP49450 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC15□□□□□ -0.01
CENPAP49450 AF228730.7-201ENST00000641842 219 ntBASIC15□□□□□ -0.01
CENPAP49450 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CENPAP49450 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CENPAP49450 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CENPAP49450 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CENPAP49450 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC15□□□□□ -0.01
CENPAP49450 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CENPAP49450 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CENPAP49450 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CENPAP49450 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CENPAP49450 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
CENPAP49450 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC15□□□□□ -0.01
CENPAP49450 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CENPAP49450 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
CENPAP49450 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC15□□□□□ -0.01
CENPAP49450 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC15□□□□□ -0.01
CENPAP49450 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC15□□□□□ -0.01
CENPAP49450 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC15□□□□□ -0.01
CENPAP49450 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC15□□□□□ -0.01
CENPAP49450 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CENPAP49450 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
CENPAP49450 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
CENPAP49450 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC14.99□□□□□ -0.01
CENPAP49450 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CENPAP49450 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC14.99□□□□□ -0.01
CENPAP49450 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms