Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
CSNK1A1P48729 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
CSNK1A1P48729 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
CSNK1A1P48729 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CSNK1A1P48729 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC14.68□□□□□ -0.06
CSNK1A1P48729 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC14.68□□□□□ -0.06
CSNK1A1P48729 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC14.68□□□□□ -0.06
CSNK1A1P48729 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CSNK1A1P48729 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CSNK1A1P48729 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
CSNK1A1P48729 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC14.68□□□□□ -0.06
CSNK1A1P48729 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CSNK1A1P48729 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
CSNK1A1P48729 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CSNK1A1P48729 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CSNK1A1P48729 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CSNK1A1P48729 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC14.68□□□□□ -0.06
CSNK1A1P48729 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CSNK1A1P48729 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC14.68□□□□□ -0.06
CSNK1A1P48729 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC14.68□□□□□ -0.06
CSNK1A1P48729 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC14.68□□□□□ -0.06
CSNK1A1P48729 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC14.68□□□□□ -0.06
CSNK1A1P48729 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
CSNK1A1P48729 POU5F1P6-201ENST00000466990 990 ntBASIC14.68□□□□□ -0.06
CSNK1A1P48729 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CSNK1A1P48729 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC14.68□□□□□ -0.06
CSNK1A1P48729 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CSNK1A1P48729 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CSNK1A1P48729 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CSNK1A1P48729 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC14.68□□□□□ -0.06
CSNK1A1P48729 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CSNK1A1P48729 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CSNK1A1P48729 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
CSNK1A1P48729 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CSNK1A1P48729 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CSNK1A1P48729 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CSNK1A1P48729 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CSNK1A1P48729 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CSNK1A1P48729 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CSNK1A1P48729 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC14.68□□□□□ -0.06
CSNK1A1P48729 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
CSNK1A1P48729 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CSNK1A1P48729 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CSNK1A1P48729 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC14.67□□□□□ -0.06
CSNK1A1P48729 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CSNK1A1P48729 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CSNK1A1P48729 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CSNK1A1P48729 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CSNK1A1P48729 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
CSNK1A1P48729 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CSNK1A1P48729 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CSNK1A1P48729 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC14.67□□□□□ -0.06
CSNK1A1P48729 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
CSNK1A1P48729 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC14.67□□□□□ -0.06
CSNK1A1P48729 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CSNK1A1P48729 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC14.67□□□□□ -0.06
CSNK1A1P48729 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CSNK1A1P48729 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CSNK1A1P48729 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
CSNK1A1P48729 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CSNK1A1P48729 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CSNK1A1P48729 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CSNK1A1P48729 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CSNK1A1P48729 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CSNK1A1P48729 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CSNK1A1P48729 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CSNK1A1P48729 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC14.67□□□□□ -0.06
CSNK1A1P48729 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC14.67□□□□□ -0.06
CSNK1A1P48729 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC14.67□□□□□ -0.06
CSNK1A1P48729 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC14.67□□□□□ -0.06
CSNK1A1P48729 AC092865.6-201ENST00000642101 219 ntBASIC14.67□□□□□ -0.06
CSNK1A1P48729 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC14.67□□□□□ -0.06
CSNK1A1P48729 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CSNK1A1P48729 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CSNK1A1P48729 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC14.67□□□□□ -0.06
CSNK1A1P48729 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC14.67□□□□□ -0.06
CSNK1A1P48729 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC14.67□□□□□ -0.06
CSNK1A1P48729 AC006449.5-201ENST00000610658 2098 ntBASIC14.67□□□□□ -0.06
CSNK1A1P48729 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
CSNK1A1P48729 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC14.67□□□□□ -0.06
CSNK1A1P48729 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC14.67□□□□□ -0.06
CSNK1A1P48729 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC14.67□□□□□ -0.06
CSNK1A1P48729 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC14.67□□□□□ -0.06
CSNK1A1P48729 AC092364.2-201ENST00000596710 2692 ntBASIC14.67□□□□□ -0.06
CSNK1A1P48729 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC14.67□□□□□ -0.06
CSNK1A1P48729 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
CSNK1A1P48729 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CSNK1A1P48729 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC14.66□□□□□ -0.06
CSNK1A1P48729 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC14.66□□□□□ -0.06
CSNK1A1P48729 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
CSNK1A1P48729 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC14.66□□□□□ -0.06
CSNK1A1P48729 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
CSNK1A1P48729 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC14.66□□□□□ -0.06
CSNK1A1P48729 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CSNK1A1P48729 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC14.66□□□□□ -0.06
CSNK1A1P48729 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CSNK1A1P48729 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC14.66□□□□□ -0.06
CSNK1A1P48729 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
CSNK1A1P48729 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC14.66□□□□□ -0.06
CSNK1A1P48729 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms