Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 SEMA4D-212ENST00000450295 5684 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
PCP4P48539 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC11.11□□□□□ -0.63
PCP4P48539 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
PCP4P48539 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
PCP4P48539 CICP3-201ENST00000440782 2455 ntBASIC11.11□□□□□ -0.63
PCP4P48539 AC130686.1-201ENST00000622936 2466 ntBASIC11.11□□□□□ -0.63
PCP4P48539 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC11.11□□□□□ -0.63
PCP4P48539 FOSB-210ENST00000591858 3658 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
PCP4P48539 ATP11AUN-201ENST00000623100 2241 ntTSL 2 BASIC11.11□□□□□ -0.63
PCP4P48539 SH3BP2-203ENST00000442312 9211 ntAPPRIS ALT2 TSL 2 BASIC11.11□□□□□ -0.63
PCP4P48539 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
PCP4P48539 SLC1A5-202ENST00000434726 1872 ntTSL 2 BASIC11.1□□□□□ -0.63
PCP4P48539 SP7-201ENST00000303846 2971 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
PCP4P48539 KIF28P-202ENST00000504864 3064 ntBASIC11.1□□□□□ -0.63
PCP4P48539 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
PCP4P48539 LINC01164-201ENST00000341866 3384 ntTSL 2 BASIC11.1□□□□□ -0.63
PCP4P48539 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC11.1□□□□□ -0.63
PCP4P48539 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
PCP4P48539 ELN-234ENST00000621115 3452 ntAPPRIS ALT2 TSL 2 BASIC11.1□□□□□ -0.63
PCP4P48539 FBN3-201ENST00000270509 9232 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
PCP4P48539 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
PCP4P48539 TECTA-201ENST00000264037 6468 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
PCP4P48539 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC11.1□□□□□ -0.63
PCP4P48539 SCAF8-203ENST00000417268 4944 ntTSL 2 BASIC11.1□□□□□ -0.63
PCP4P48539 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC11.1□□□□□ -0.63
PCP4P48539 BX640514.1-201ENST00000583223 1918 ntBASIC11.1□□□□□ -0.63
PCP4P48539 CYTH2-213ENST00000620214 2020 ntTSL 5 BASIC11.1□□□□□ -0.63
PCP4P48539 CACNB1-202ENST00000394303 3742 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
PCP4P48539 THSD1-201ENST00000258613 2962 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
PCP4P48539 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
PCP4P48539 VILL-201ENST00000283713 2970 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
PCP4P48539 IRS4-201ENST00000372129 3928 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
PCP4P48539 LRPAP1-202ENST00000500728 7819 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
PCP4P48539 MSL3-207ENST00000398527 2324 ntTSL 2 BASIC11.1□□□□□ -0.63
PCP4P48539 CST3-203ENST00000398411 3286 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
PCP4P48539 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
PCP4P48539 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
PCP4P48539 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC11.1□□□□□ -0.63
PCP4P48539 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
PCP4P48539 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
PCP4P48539 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
PCP4P48539 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC11.1□□□□□ -0.63
PCP4P48539 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
PCP4P48539 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC11.1□□□□□ -0.63
PCP4P48539 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
PCP4P48539 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
PCP4P48539 NDRG4-204ENST00000394282 3626 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
PCP4P48539 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC11.1□□□□□ -0.63
PCP4P48539 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC11.1□□□□□ -0.63
PCP4P48539 PRPF40B-202ENST00000380281 3154 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
PCP4P48539 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
PCP4P48539 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
PCP4P48539 PCDHGA6-201ENST00000517434 4775 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
PCP4P48539 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
PCP4P48539 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
PCP4P48539 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
PCP4P48539 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
PCP4P48539 CEACAM20-206ENST00000621342 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
PCP4P48539 TRPC7-201ENST00000352189 2241 ntTSL 5 BASIC11.09□□□□□ -0.63
PCP4P48539 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
PCP4P48539 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
PCP4P48539 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
PCP4P48539 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC11.09□□□□□ -0.63
PCP4P48539 NBN-203ENST00000409330 4523 ntTSL 5 BASIC11.09□□□□□ -0.63
PCP4P48539 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
PCP4P48539 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
PCP4P48539 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
PCP4P48539 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
PCP4P48539 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
PCP4P48539 SLC25A5-AS1-203ENST00000446986 1874 ntTSL 2 BASIC11.09□□□□□ -0.63
PCP4P48539 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC11.09□□□□□ -0.63
PCP4P48539 CH25H-201ENST00000371852 1686 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
PCP4P48539 EXOC3-AS1-202ENST00000623673 1663 ntBASIC11.09□□□□□ -0.63
PCP4P48539 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
PCP4P48539 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
PCP4P48539 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
PCP4P48539 AC009086.3-201ENST00000623486 1008 ntBASIC11.09□□□□□ -0.63
PCP4P48539 PLOD2-201ENST00000282903 3732 ntAPPRIS P4 TSL 1 (best) BASIC11.09□□□□□ -0.63
PCP4P48539 LRFN5-201ENST00000298119 3723 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
PCP4P48539 CD99L2-203ENST00000370377 3604 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
PCP4P48539 SLC5A6-201ENST00000310574 3231 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
PCP4P48539 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC11.09□□□□□ -0.63
PCP4P48539 BAHD1-203ENST00000561234 4698 ntAPPRIS ALT1 TSL 1 (best) BASIC11.09□□□□□ -0.63
PCP4P48539 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC11.09□□□□□ -0.63
PCP4P48539 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC11.09□□□□□ -0.63
PCP4P48539 TNC-212ENST00000542877 5517 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
PCP4P48539 AP001993.1-201ENST00000527317 2337 ntTSL 2 BASIC11.09□□□□□ -0.63
PCP4P48539 EWSAT1-201ENST00000415504 2214 ntTSL 2 BASIC11.09□□□□□ -0.63
PCP4P48539 PPP1R26P2-201ENST00000611403 3595 ntBASIC11.09□□□□□ -0.63
PCP4P48539 LCA5-202ENST00000392959 4719 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
PCP4P48539 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
PCP4P48539 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
PCP4P48539 AAAS-201ENST00000209873 1840 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
PCP4P48539 DLGAP1-203ENST00000400147 5258 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
PCP4P48539 DLGAP1-206ENST00000400155 5257 ntTSL 2 BASIC11.09□□□□□ -0.63
PCP4P48539 FEM1AP3-201ENST00000403722 1741 ntBASIC11.09□□□□□ -0.63
PCP4P48539 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
PCP4P48539 ERN2-201ENST00000256797 3549 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
PCP4P48539 ANKDD1A-201ENST00000319580 3110 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
PCP4P48539 SRSF1-205ENST00000582730 3117 ntTSL 2 BASIC11.09□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms