Protein–RNA interactions for Protein: P48067

SLC6A9, Sodium- and chloride-dependent glycine transporter 1, humanhuman

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A9P48067 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
SLC6A9P48067 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC14.65□□□□□ -0.06
SLC6A9P48067 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.07
SLC6A9P48067 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
SLC6A9P48067 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SLC6A9P48067 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SLC6A9P48067 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SLC6A9P48067 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC14.64□□□□□ -0.07
SLC6A9P48067 AC008741.2-201ENST00000612792 3115 ntBASIC14.64□□□□□ -0.07
SLC6A9P48067 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
SLC6A9P48067 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SLC6A9P48067 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SLC6A9P48067 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
SLC6A9P48067 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
SLC6A9P48067 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SLC6A9P48067 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC14.64□□□□□ -0.07
SLC6A9P48067 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC14.64□□□□□ -0.07
SLC6A9P48067 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
SLC6A9P48067 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SLC6A9P48067 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SLC6A9P48067 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SLC6A9P48067 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC14.64□□□□□ -0.07
SLC6A9P48067 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
SLC6A9P48067 KRT18P27-201ENST00000427733 1299 ntBASIC14.64□□□□□ -0.07
SLC6A9P48067 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC14.64□□□□□ -0.07
SLC6A9P48067 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC14.64□□□□□ -0.07
SLC6A9P48067 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
SLC6A9P48067 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC14.64□□□□□ -0.07
SLC6A9P48067 SLC25A6P2-201ENST00000497974 877 ntBASIC14.64□□□□□ -0.07
SLC6A9P48067 AC093909.1-201ENST00000504731 1122 ntBASIC14.64□□□□□ -0.07
SLC6A9P48067 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SLC6A9P48067 ETFA-208ENST00000559602 792 ntTSL 3 BASIC14.64□□□□□ -0.07
SLC6A9P48067 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC14.64□□□□□ -0.07
SLC6A9P48067 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC14.64□□□□□ -0.07
SLC6A9P48067 AC091167.2-201ENST00000579581 588 ntBASIC14.64□□□□□ -0.07
SLC6A9P48067 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SLC6A9P48067 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC14.64□□□□□ -0.07
SLC6A9P48067 PGM5P2-202ENST00000637225 1043 ntBASIC14.64□□□□□ -0.07
SLC6A9P48067 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC14.64□□□□□ -0.07
SLC6A9P48067 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SLC6A9P48067 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SLC6A9P48067 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SLC6A9P48067 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC14.64□□□□□ -0.07
SLC6A9P48067 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SLC6A9P48067 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC14.64□□□□□ -0.07
SLC6A9P48067 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SLC6A9P48067 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SLC6A9P48067 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
SLC6A9P48067 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SLC6A9P48067 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SLC6A9P48067 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
SLC6A9P48067 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
SLC6A9P48067 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SLC6A9P48067 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
SLC6A9P48067 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
SLC6A9P48067 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SLC6A9P48067 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC14.64□□□□□ -0.07
SLC6A9P48067 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
SLC6A9P48067 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SLC6A9P48067 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SLC6A9P48067 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
SLC6A9P48067 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SLC6A9P48067 AGK-211ENST00000629555 2765 ntTSL 5 BASIC14.63□□□□□ -0.07
SLC6A9P48067 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SLC6A9P48067 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC14.63□□□□□ -0.07
SLC6A9P48067 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SLC6A9P48067 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC14.63□□□□□ -0.07
SLC6A9P48067 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC14.63□□□□□ -0.07
SLC6A9P48067 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
SLC6A9P48067 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SLC6A9P48067 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SLC6A9P48067 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SLC6A9P48067 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC14.63□□□□□ -0.07
SLC6A9P48067 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
SLC6A9P48067 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC14.63□□□□□ -0.07
SLC6A9P48067 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC14.63□□□□□ -0.07
SLC6A9P48067 AC006449.5-201ENST00000610658 2098 ntBASIC14.63□□□□□ -0.07
SLC6A9P48067 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SLC6A9P48067 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
SLC6A9P48067 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC14.63□□□□□ -0.07
SLC6A9P48067 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SLC6A9P48067 AC073621.1-201ENST00000392730 636 ntBASIC14.63□□□□□ -0.07
SLC6A9P48067 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC14.63□□□□□ -0.07
SLC6A9P48067 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC14.63□□□□□ -0.07
SLC6A9P48067 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
SLC6A9P48067 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC14.63□□□□□ -0.07
SLC6A9P48067 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC14.63□□□□□ -0.07
SLC6A9P48067 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC14.63□□□□□ -0.07
SLC6A9P48067 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
SLC6A9P48067 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC14.63□□□□□ -0.07
SLC6A9P48067 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC14.63□□□□□ -0.07
SLC6A9P48067 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
SLC6A9P48067 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC14.63□□□□□ -0.07
SLC6A9P48067 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SLC6A9P48067 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC14.63□□□□□ -0.07
SLC6A9P48067 AP001350.2-201ENST00000625104 1094 ntBASIC14.63□□□□□ -0.07
SLC6A9P48067 AL139011.1-202ENST00000642063 584 ntBASIC14.63□□□□□ -0.07
SLC6A9P48067 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC14.63□□□□□ -0.07
SLC6A9P48067 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
SLC6A9P48067 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC14.63□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms