Protein–RNA interactions for Protein: P48058

GRIA4, Glutamate receptor 4, humanhuman

Predictions only

Length 902 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA4P48058 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
GRIA4P48058 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
GRIA4P48058 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
GRIA4P48058 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
GRIA4P48058 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.87■□□□□ 0.29
GRIA4P48058 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC16.87■□□□□ 0.29
GRIA4P48058 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC16.87■□□□□ 0.29
GRIA4P48058 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
GRIA4P48058 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
GRIA4P48058 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
GRIA4P48058 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
GRIA4P48058 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
GRIA4P48058 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
GRIA4P48058 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
GRIA4P48058 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
GRIA4P48058 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
GRIA4P48058 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.86■□□□□ 0.29
GRIA4P48058 CICP6-201ENST00000457191 2729 ntBASIC16.86■□□□□ 0.29
GRIA4P48058 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
GRIA4P48058 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
GRIA4P48058 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
GRIA4P48058 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
GRIA4P48058 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
GRIA4P48058 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
GRIA4P48058 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
GRIA4P48058 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
GRIA4P48058 HMGA1P7-201ENST00000406908 502 ntBASIC16.86■□□□□ 0.29
GRIA4P48058 AL671277.1-201ENST00000429656 993 ntBASIC16.86■□□□□ 0.29
GRIA4P48058 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
GRIA4P48058 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC16.86■□□□□ 0.29
GRIA4P48058 SPDYE11-202ENST00000450699 704 ntBASIC16.86■□□□□ 0.29
GRIA4P48058 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC16.86■□□□□ 0.29
GRIA4P48058 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC16.86■□□□□ 0.29
GRIA4P48058 SPDYE9P-201ENST00000570642 692 ntBASIC16.86■□□□□ 0.29
GRIA4P48058 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
GRIA4P48058 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC16.86■□□□□ 0.29
GRIA4P48058 SPDYE10P-202ENST00000612005 668 ntBASIC16.86■□□□□ 0.29
GRIA4P48058 SPDYE8P-202ENST00000612377 668 ntBASIC16.86■□□□□ 0.29
GRIA4P48058 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
GRIA4P48058 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC16.86■□□□□ 0.29
GRIA4P48058 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
GRIA4P48058 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
GRIA4P48058 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC16.86■□□□□ 0.29
GRIA4P48058 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
GRIA4P48058 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
GRIA4P48058 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.86■□□□□ 0.29
GRIA4P48058 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC16.86■□□□□ 0.29
GRIA4P48058 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
GRIA4P48058 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
GRIA4P48058 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
GRIA4P48058 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC16.86■□□□□ 0.29
GRIA4P48058 AC026691.1-201ENST00000602502 2017 ntBASIC16.86■□□□□ 0.29
GRIA4P48058 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
GRIA4P48058 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
GRIA4P48058 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC16.85■□□□□ 0.29
GRIA4P48058 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.85■□□□□ 0.29
GRIA4P48058 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
GRIA4P48058 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC16.85■□□□□ 0.29
GRIA4P48058 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
GRIA4P48058 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
GRIA4P48058 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
GRIA4P48058 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC16.85■□□□□ 0.29
GRIA4P48058 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
GRIA4P48058 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
GRIA4P48058 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
GRIA4P48058 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
GRIA4P48058 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
GRIA4P48058 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.85■□□□□ 0.29
GRIA4P48058 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
GRIA4P48058 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
GRIA4P48058 AMT-206ENST00000458307 1860 ntTSL 2 BASIC16.85■□□□□ 0.29
GRIA4P48058 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC16.85■□□□□ 0.29
GRIA4P48058 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
GRIA4P48058 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
GRIA4P48058 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC16.85■□□□□ 0.29
GRIA4P48058 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
GRIA4P48058 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC16.85■□□□□ 0.29
GRIA4P48058 WDR53-204ENST00000433160 887 ntTSL 5 BASIC16.85■□□□□ 0.29
GRIA4P48058 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC16.85■□□□□ 0.29
GRIA4P48058 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC16.85■□□□□ 0.29
GRIA4P48058 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
GRIA4P48058 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC16.85■□□□□ 0.29
GRIA4P48058 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC16.85■□□□□ 0.29
GRIA4P48058 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC16.85■□□□□ 0.29
GRIA4P48058 THTPA-204ENST00000554970 569 ntTSL 4 BASIC16.85■□□□□ 0.29
GRIA4P48058 THTPA-206ENST00000556015 535 ntTSL 3 BASIC16.85■□□□□ 0.29
GRIA4P48058 AC093520.2-201ENST00000561830 333 ntBASIC16.85■□□□□ 0.29
GRIA4P48058 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC16.85■□□□□ 0.29
GRIA4P48058 MIR3909-201ENST00000579518 119 ntBASIC16.85■□□□□ 0.29
GRIA4P48058 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
GRIA4P48058 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
GRIA4P48058 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC16.85■□□□□ 0.29
GRIA4P48058 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC16.85■□□□□ 0.29
GRIA4P48058 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
GRIA4P48058 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
GRIA4P48058 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
GRIA4P48058 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
GRIA4P48058 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.85■□□□□ 0.29
GRIA4P48058 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
GRIA4P48058 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms