Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
USP8P40818 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC18.03■□□□□ 0.48
USP8P40818 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
USP8P40818 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
USP8P40818 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
USP8P40818 AL671710.1-201ENST00000610245 2349 ntBASIC18.03■□□□□ 0.48
USP8P40818 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
USP8P40818 MRPL20P1-201ENST00000400819 433 ntBASIC18.03■□□□□ 0.48
USP8P40818 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC18.03■□□□□ 0.48
USP8P40818 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC18.03■□□□□ 0.48
USP8P40818 AC093909.1-201ENST00000504731 1122 ntBASIC18.03■□□□□ 0.48
USP8P40818 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC18.03■□□□□ 0.48
USP8P40818 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC18.03■□□□□ 0.48
USP8P40818 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC18.03■□□□□ 0.48
USP8P40818 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC18.03■□□□□ 0.48
USP8P40818 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC18.03■□□□□ 0.48
USP8P40818 MIR7706-201ENST00000613747 67 ntBASIC18.03■□□□□ 0.48
USP8P40818 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC18.03■□□□□ 0.48
USP8P40818 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
USP8P40818 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
USP8P40818 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC18.03■□□□□ 0.48
USP8P40818 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC18.03■□□□□ 0.48
USP8P40818 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC18.03■□□□□ 0.48
USP8P40818 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
USP8P40818 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
USP8P40818 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
USP8P40818 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
USP8P40818 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC18.02■□□□□ 0.48
USP8P40818 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC18.02■□□□□ 0.48
USP8P40818 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
USP8P40818 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
USP8P40818 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
USP8P40818 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
USP8P40818 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
USP8P40818 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
USP8P40818 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC18.02■□□□□ 0.48
USP8P40818 SLC4A1APP2-201ENST00000424054 1259 ntBASIC18.02■□□□□ 0.48
USP8P40818 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC18.02■□□□□ 0.48
USP8P40818 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
USP8P40818 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
USP8P40818 AC107918.2-201ENST00000530817 355 ntBASIC18.02■□□□□ 0.48
USP8P40818 RIN3-211ENST00000557762 517 ntTSL 3 BASIC18.02■□□□□ 0.48
USP8P40818 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
USP8P40818 AP001005.1-201ENST00000571755 1248 ntBASIC18.02■□□□□ 0.48
USP8P40818 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
USP8P40818 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC18.02■□□□□ 0.48
USP8P40818 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
USP8P40818 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC18.02■□□□□ 0.48
USP8P40818 AC116407.3-201ENST00000623905 1129 ntBASIC18.02■□□□□ 0.48
USP8P40818 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC18.02■□□□□ 0.48
USP8P40818 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
USP8P40818 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
USP8P40818 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
USP8P40818 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
USP8P40818 AL365209.1-201ENST00000624418 6473 ntBASIC18.02■□□□□ 0.47
USP8P40818 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
USP8P40818 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
USP8P40818 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.47
USP8P40818 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
USP8P40818 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
USP8P40818 AC129492.6-201ENST00000611383 1305 ntBASIC18.01■□□□□ 0.47
USP8P40818 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC18.01■□□□□ 0.47
USP8P40818 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
USP8P40818 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
USP8P40818 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
USP8P40818 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
USP8P40818 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
USP8P40818 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
USP8P40818 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
USP8P40818 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
USP8P40818 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
USP8P40818 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC18.01■□□□□ 0.47
USP8P40818 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
USP8P40818 NORAD-201ENST00000565493 5339 ntBASIC18.01■□□□□ 0.47
USP8P40818 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
USP8P40818 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC18.01■□□□□ 0.47
USP8P40818 AC098831.1-202ENST00000438821 336 ntBASIC18.01■□□□□ 0.47
USP8P40818 AC009078.2-202ENST00000463353 338 ntBASIC18.01■□□□□ 0.47
USP8P40818 PPIE-208ENST00000470213 927 ntTSL 3 BASIC18.01■□□□□ 0.47
USP8P40818 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC18.01■□□□□ 0.47
USP8P40818 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC18.01■□□□□ 0.47
USP8P40818 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC18.01■□□□□ 0.47
USP8P40818 MIR4751-201ENST00000578027 74 ntBASIC18.01■□□□□ 0.47
USP8P40818 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
USP8P40818 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC18.01■□□□□ 0.47
USP8P40818 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC18.01■□□□□ 0.47
USP8P40818 SLC22A20-204ENST00000530038 1673 ntBASIC18.01■□□□□ 0.47
USP8P40818 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
USP8P40818 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC18.01■□□□□ 0.47
USP8P40818 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
USP8P40818 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
USP8P40818 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
USP8P40818 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
USP8P40818 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
USP8P40818 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
USP8P40818 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
USP8P40818 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC18.01■□□□□ 0.47
USP8P40818 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
USP8P40818 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
USP8P40818 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms