Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 RNF216P1-203ENST00000404404 2427 ntBASIC13.47□□□□□ -0.25
CEACAM3P40198 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
CEACAM3P40198 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CEACAM3P40198 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CEACAM3P40198 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC13.47□□□□□ -0.25
CEACAM3P40198 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC13.47□□□□□ -0.25
CEACAM3P40198 AC092474.2-201ENST00000424288 719 ntBASIC13.47□□□□□ -0.25
CEACAM3P40198 COX10-202ENST00000429152 875 ntTSL 2 BASIC13.47□□□□□ -0.25
CEACAM3P40198 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC13.47□□□□□ -0.25
CEACAM3P40198 FAM58CP-201ENST00000435741 640 ntBASIC13.47□□□□□ -0.25
CEACAM3P40198 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC13.47□□□□□ -0.25
CEACAM3P40198 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC13.47□□□□□ -0.25
CEACAM3P40198 AP002472.1-201ENST00000577490 586 ntBASIC13.47□□□□□ -0.25
CEACAM3P40198 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC13.47□□□□□ -0.25
CEACAM3P40198 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC13.47□□□□□ -0.25
CEACAM3P40198 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC13.47□□□□□ -0.25
CEACAM3P40198 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC13.47□□□□□ -0.25
CEACAM3P40198 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC13.47□□□□□ -0.25
CEACAM3P40198 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CEACAM3P40198 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC13.47□□□□□ -0.25
CEACAM3P40198 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CEACAM3P40198 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
CEACAM3P40198 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC13.47□□□□□ -0.25
CEACAM3P40198 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC13.47□□□□□ -0.25
CEACAM3P40198 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
CEACAM3P40198 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC13.47□□□□□ -0.25
CEACAM3P40198 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CEACAM3P40198 GPAA1P2-202ENST00000606848 1787 ntBASIC13.47□□□□□ -0.25
CEACAM3P40198 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
CEACAM3P40198 NKILA-202ENST00000614771 2598 ntBASIC13.47□□□□□ -0.25
CEACAM3P40198 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
CEACAM3P40198 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CEACAM3P40198 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC13.47□□□□□ -0.25
CEACAM3P40198 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CEACAM3P40198 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC13.47□□□□□ -0.25
CEACAM3P40198 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CEACAM3P40198 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CEACAM3P40198 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CEACAM3P40198 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CEACAM3P40198 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CEACAM3P40198 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
CEACAM3P40198 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC13.47□□□□□ -0.25
CEACAM3P40198 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CEACAM3P40198 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CEACAM3P40198 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CEACAM3P40198 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
CEACAM3P40198 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
CEACAM3P40198 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
CEACAM3P40198 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CEACAM3P40198 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC13.46□□□□□ -0.25
CEACAM3P40198 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
CEACAM3P40198 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
CEACAM3P40198 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CEACAM3P40198 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CEACAM3P40198 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CEACAM3P40198 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC13.46□□□□□ -0.25
CEACAM3P40198 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
CEACAM3P40198 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CEACAM3P40198 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CEACAM3P40198 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
CEACAM3P40198 SNX33P1-201ENST00000592116 1762 ntBASIC13.46□□□□□ -0.25
CEACAM3P40198 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CEACAM3P40198 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC13.46□□□□□ -0.25
CEACAM3P40198 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CEACAM3P40198 C8orf49-201ENST00000525043 1968 ntBASIC13.46□□□□□ -0.25
CEACAM3P40198 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
CEACAM3P40198 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC13.46□□□□□ -0.25
CEACAM3P40198 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
CEACAM3P40198 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
CEACAM3P40198 YBX2P1-201ENST00000394192 760 ntBASIC13.46□□□□□ -0.25
CEACAM3P40198 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC13.46□□□□□ -0.25
CEACAM3P40198 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
CEACAM3P40198 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC13.46□□□□□ -0.25
CEACAM3P40198 RN7SL589P-201ENST00000481268 310 ntBASIC13.46□□□□□ -0.25
CEACAM3P40198 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CEACAM3P40198 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC13.46□□□□□ -0.25
CEACAM3P40198 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC13.46□□□□□ -0.25
CEACAM3P40198 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC13.46□□□□□ -0.25
CEACAM3P40198 AL671883.3-201ENST00000603274 991 ntBASIC13.46□□□□□ -0.25
CEACAM3P40198 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC13.46□□□□□ -0.25
CEACAM3P40198 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
CEACAM3P40198 AC091812.2-201ENST00000619081 385 ntBASIC13.46□□□□□ -0.25
CEACAM3P40198 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CEACAM3P40198 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CEACAM3P40198 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC13.46□□□□□ -0.25
CEACAM3P40198 AL512652.2-201ENST00000625156 1716 ntBASIC13.46□□□□□ -0.25
CEACAM3P40198 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CEACAM3P40198 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC13.46□□□□□ -0.25
CEACAM3P40198 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
CEACAM3P40198 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC13.46□□□□□ -0.26
CEACAM3P40198 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
CEACAM3P40198 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
CEACAM3P40198 WASH6P-202ENST00000359512 1437 ntBASIC13.46□□□□□ -0.26
CEACAM3P40198 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
CEACAM3P40198 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
CEACAM3P40198 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC13.46□□□□□ -0.26
CEACAM3P40198 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC13.46□□□□□ -0.26
CEACAM3P40198 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CEACAM3P40198 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC13.45□□□□□ -0.26
CEACAM3P40198 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms